Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00478 ATGGCGAAAGGTGGGAAGCTAACCAAGCTCAAGTCAGTACTCAAGAAATGGAACTCTTTCAGCAACAAGCAGAGCCGCCCCAGCATCAGCGCCGTCGCTGACGACGAATCCTCCTCCATTTCAAGATCGGACCTCCACCCTGTCTACGTCGGGAAGTCACGGAGGCGCTACCTCGTAACCTCCGACGTCATCGACCACCCTCTGTTCCGTGAGCTAGTGGAGCGCTCCCGCGACTCCGACGACGACACCGTCAATGTAGCATGCGAGGTTGTCCTGTTCGAACACTTGCTCTGGATGCTCGAGAATGCTGACCCGCAGCCCGAGTCACTCGACGAGCTCGTCGAGTTCTACGCTTGTTA 359 0.571 MAKGGKLTKLKSVLKKWNSFSNKQSRPSISAVADDESSSISRSDLHPVYVGKSRRRYLVTSDVIDHPLFRELVERSRDSDDDTVNVACEVVLFEHLLWMLENADPQPESLDELVEFYAC 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00478 119 PANTHER SMALL AUXIN-UP RNA-RELATED 4 119 - -
Bva06g00478 119 Pfam Auxin responsive protein 15 100 IPR003676 GO:0009733
Bva06g00478 119 MobiDBLite consensus disorder prediction 20 39 - -
Bva06g00478 119 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 119 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00478 Bva-Chr6 5485402 5486111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00478 3 100 Calmodulin-binding Proteins AT4G34750 25.490 7.84e-08 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00478 - - qsu:112019930 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00478 06 5485402 5486111 Bva06g00478 06 5485402 5486111 ECH