Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00474 ATGGGGCGAGAGGTTCCCaagaagcagcagcagcaggtAGCCTACACAGTGGATCAACTTGTCGCCGTTAATCGCTATAATCCTGATATTCTTCCCGATCTCGAAAACTATGTCAACGAGCAGGTTTCCTCACAAACATACAGCCTGGATGCAAATCTTTGCCTTCTTCGCCTCTATCAGTTTGAGCTAGAGAGAATGAGTGTACAGATTGTAGCTCGCATATTGGTGAAGGCCCTCATGGCAATGCCAGCTCCAGACTTCAGCTTGTGTCTCTTTTTAATTCCAGAACGTGTGCAAATGGAGGAGCAGTTCAAGACACTGATTGTTCTATCACACTATTTAGAGACAGGACGATTTCGTCAGTTTTGGGATGAAGCAGCAAAGAGTCGTCATATAGTTGAAGCTGTGCCAGGATTTGAGCAAGCAATTCAAGGCTATGCGATTCATATCCTTTCTTTAACTTACCAAAAGGTTCCTAGATCTGTACTTAGCGAgGCTATCAATATAGAAGGTTTATCCTTGGATAAATTCCTGGAACACCAAGTAACCAACTCTGGTTGGGTTATTGAGAAAGGGCAAGGTAGGGGTCAACTTATTGTCCTACCTAAAAATCAATACAACGACCCTGTTTTGAAGAAAAACACTGCAGATACCATACCATTGGAGCACATTACCCGTATCTTCCCTATTCTCGGCTA 698 0.4198 MGREVPKKQQQQVAYTVDQLVAVNRYNPDILPDLENYVNEQVSSQTYSLDANLCLLRLYQFELERMSVQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEAAKSRHIVEAVPGFEQAIQGYAIHILSLTYQKVPRSVLSEAINIEGLSLDKFLEHQVTNSGWVIEKGQGRGQLIVLPKNQYNDPVLKKNTADTIPLEHITRIFPILG 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00474 232 Gene3D - 128 230 IPR036388 -
Bva06g00474 232 Gene3D ARM repeat; domain 1 7 125 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Bva06g00474 232 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 10 232 IPR009374 GO:0003743|GO:0005737|GO:0005852
Bva06g00474 232 ProSiteProfiles PCI domain profile. 47 206 IPR000717 -
Bva06g00474 232 SUPERFAMILY ARM repeat 9 134 IPR016024 -
Bva06g00474 232 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 8 232 IPR009374 GO:0003743|GO:0005737|GO:0005852
Bva06g00474 232 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT K 10 232 - -
Bva06g00474 232 SUPERFAMILY "Winged helix" DNA-binding domain 137 229 IPR036390 -
Bva06g00474 232 Pfam CSN8/PSMD8/EIF3K family 68 193 IPR033464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00474 Bva-Chr6 5437408 5440068 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00474 1 232 Eukaryotic Initiation Factors Gene Family AT4G33250 75.431 8.50e-130 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00474 K15028 - tcc:18588218 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00474 06 5437408 5440068 Bva06g00474 06 5437408 5440068 ECH