Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00464 ATGGAGGGTTACCCAGAGAATCTCCACGATGAATGCAGCCATACCAGATATCCTAACCTATGTGTACAAACCTTAATGGGAATGGGGTCAGGGAATCAAAGTGCTGATATCATTTCACATCTTGTGAACAAAACCATATTTGAAACCATGTTACCAAGTTCATATTTTGCAGAATTTGGTTCCCTTCTTGAAGCTCAGGATGACCCACAGTCCCATTCTGTCAAAGGCTATTGCGAAGAACTTATGAGCATGTCACTCAAAAGGCTAGACCAGGCAATGAAAGCCCTGAAATCCCCAATAAGAAACAAGCATGACGTCCAAACGTGGCTAAGTGCTTCTCTGACATTTCAGCAAACTTGTAAAGACTATGCAGATACGCATGGCCTTGAAATAATCTCTAAGAAGATGGACTATCTTTCAGCACTGGCAAGTAACCCCTTAGCTCTCATTAACCGGATCACCGGCATACCAAAGAGCACAAAAGCTCGTCGGCTTCTGGGCAgcgaagaggaagaaaaatttcCCAGCTGGGTAacaggaagagaaagaaagctgCTTCAAGCAGGCACCGTAAAAGCAAATGCCATAGTTGCGCAAGATGGGACGGGCAACTATAAGACGATTTCACAAGCTATTCAGGCTGCTTCTGGATCAAGGTTTGTGATTTATGTTAAGAAAGGAGTTTACAGGGAGAAGATTCGCACCAACAAGGACGGTATCACATTGATTGGTGAAGGCAAATATTCCACTATCATTAGTGGTGATGACAGCGTGAAGGGAGGCGCTTCCATGCCTGGCTCCGCCACATTCACAATTACAGGAGATGGATTTATTGCGATAGATATTGGATTCCACAACAACGCAGGCCCTCATGGCGAACAAGCCTTGGCTCTCAACATTGCTTCGGATCGTTCAGTCCTCTATAGATGCAGCATCGCAGGCTACCAAGACACTCTCTACGCACTCGCCCTACGTCAATTCTACAGAGAATGTGACATATACGGCACCATTGACTTCATCTTTGGAAACGCAGCTGCCGTTTTCCAAAGCTGCAATCTGGTGCTACGCCGTCCACAGCGTGGATACAATGTCATTCTAGCCAACGGCAGAACTGACCCTGGACAAAACACAGGCTTCTCTGTTCAAAAATGTAACATCATGCCAAGTTCAGATTTTTCTGCTGTGAAACATTCTTTCAATTCTTATCTTGGGAGGCCATGGAAATATTACTCTAGGGCAGTGATAATGGAATCTACGATAGACGGCGCGATTTCGGGTAGGGGATGGATTGAATGGCCCGGTTATGGGAGCTCTGTGCTAAAGACTTTGTATTTTGCAGAATATGCTAATGCAGGCCCTGGTGCTGGAACTGGTAATAGGGTGAAGTGGCCTGGGTTTCATGTCATTGGAGCTCCAGAGGCTGAGAAGTTCACTGTGTCTAATTTTATTGCTGGAAATTCTTGGATTCCCTCCACTGGGGTTACCTTCGTTTCAGGACTAAACTA 1505 0.4432 MEGYPENLHDECSHTRYPNLCVQTLMGMGSGNQSADIISHLVNKTIFETMLPSSYFAEFGSLLEAQDDPQSHSVKGYCEELMSMSLKRLDQAMKALKSPIRNKHDVQTWLSASLTFQQTCKDYADTHGLEIISKKMDYLSALASNPLALINRITGIPKSTKARRLLGSEEEEKFPSWVTGRERKLLQAGTVKANAIVAQDGTGNYKTISQAIQAASGSRFVIYVKKGVYREKIRTNKDGITLIGEGKYSTIISGDDSVKGGASMPGSATFTITGDGFIAIDIGFHNNAGPHGEQALALNIASDRSVLYRCSIAGYQDTLYALALRQFYRECDIYGTIDFIFGNAAAVFQSCNLVLRRPQRGYNVILANGRTDPGQNTGFSVQKCNIMPSSDFSAVKHSFNSYLGRPWKYYSRAVIMESTIDGAISGRGWIEWPGYGSSVLKTLYFAEYANAGPGAGTGNRVKWPGFHVIGAPEAEKFTVSNFIAGNSWIPSTGVTFVSGLN 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00464 501 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 8 154 IPR035513 -
Bva06g00464 501 Gene3D Invertase/pectin methylesterase inhibitor family protein 6 154 IPR035513 -
Bva06g00464 501 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 54-RELATED 6 499 - -
Bva06g00464 501 PANTHER PECTINESTERASE 6 499 - -
Bva06g00464 501 SUPERFAMILY Pectin lyase-like 191 499 IPR011050 -
Bva06g00464 501 CDD PMEI-like_3 12 155 - -
Bva06g00464 501 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 153 IPR006501 GO:0004857
Bva06g00464 501 Pfam Plant invertase/pectin methylesterase inhibitor 9 149 IPR006501 GO:0004857
Bva06g00464 501 Pfam Pectinesterase 194 486 IPR000070 GO:0030599|GO:0042545
Bva06g00464 501 Gene3D - 188 500 IPR012334 -
Bva06g00464 501 SMART PMEI_2 3 149 IPR006501 GO:0004857
Bva06g00464 501 ProSitePatterns Pectinesterase signature 2. 333 342 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00464 Bva-Chr6 5368618 5371858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00464 12 501 Carbohydrate Esterase AT3G49220 44.380 9.01e-133 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00464 K01051 - tcc:18588205 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00464 06 5368618 5371858 Bva06g00464 06 5368618 5371858 ECH