Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00463 ATGGCATTCCAAGATTTCGATCTCATATCGGACCGGCGTAAAGAGGAGAGGAAACAAAAGATCAAGAAGAGGATAATGATCGCCGTAGTCTCTATCTTGGTCCTTATCGGTCTAGCGGCCGCCGCAGTTTTCGTGCTCGTCGAGCAAAACAAGAATGCCGGCGAGAAAAACGAGAATGCCGGCAAAGgcaaggagaagaaagaatcgCCGTCGACGGAACATGATTCCGATAGCAAAGATGGATTACGTGGACAGAAGATGGTGAAAACTTTGTGCAGCTCCACAGATTTCAAGAGCAAGTGCGAAACCTCTCTCGGCAATGCATCAAAAGGTGATCCTAAACTGAACCAACCAAAAGATCTTCTCGAGGTTGCCATCAAAGCTGCCGAGGAAGCCATAAACAAGGCCTTCGACAAATCGAAGTCGTTGAAGTTTGAATCTGAAAAGGACAAAGGAGCATTTGAAGATTGTAAGCAACTCATCGAGGATGCCAAGGAAGAAATAGGATTTTCTCTCTCAGAAGTTGGCAAAGATGATTTGAAAACGCTTGTGAACAAAACTGATGATGTGAGCAATTGGCTGAGTGCAGTCATATCTTACCACGAAACATGCATCGATGGATTTCCCGATGGAAAATTGAAGACAGATATTAAGAACATCTTCAAGGATCCTAAGGAATTCGTCAGCAATGCCCTTGCTATTATGTCCGATGTTGCTTCGTTGCTTTCTACGTTTCAATCAATAACCGTCACCACTGCTCGTCATTTGCTTGAAGACAAAGCAAGCTCTCCAGCTGATGCTTTGGGCAAAGATGGGCTTCCTGATTGGATGGGCGACGACCAGCGAAGGGTGTTGAAAGCGGCAGATGATAAGCCCACACCTAATGTCACCGTGGCCAAAGATGGCAGCGGACAGTTCAAAACCATCTCCGAGGCTTTAGCTGCCATCCCTGAAAAATATGAAGGAAGATATGTGGTTTACGTTAAAGAAGGGGTGTACGAGGAGACTGTGacaataacaaagaaaatggtaaATATAACCTTGTATGGCGATAGTTCACAGAAGAGCATCATCACCGGCAGCAAAAACTTTGTTGATGGTGTCAGAACTTTCCAAACTGCAACTTTTGTGGTTCTAGGAGAAGGGTTTTTAGGCAAGGCAATGGGATTCAGAAACACTGCTGGCCCTGAGAAGCATCAAGCAGTGGCTGTTAGAGTTCAAGCAGACCGTGCAGTGTTTGTGAACAGCCGCTTTGAGGGCTACCAAGACACATTATACACACAAACCCACAGACAATTCTACAGAAGCTGTGTAATTTCAGGCACAGTTGATTTCATCTTCGGTGACGCAGCTGCAGTGTTCCAGAACTGCATAATATCTCTCAGAAAACCACTGGACAACCAACAGAACATAGTCACCGCGCAAGGCAGGATCGACAAGCGCGAAACCACAGCGCTTGTCTTGCAGAACTGTCAGATTAAGGCCGATGACAAGCTCGTTCCAGACAAGGCCAAAATCAAGAGCTACCTTGGAAGGCCATGGAAGGAATACTCAACAACCATTGTCATGGAATCAGAAATTGAAGATGTAATTCACCCTGATGGGTGGTTGCCCTGGGAAGGAGATTTTGCACTCAAGACACTGTTTTATGGTGAGTTCAACAACACAGGGCCTGGTGCCAGCACTAGTGCCAGGGTCAAATGGCCTGGCTACAAGGTCTTGACCAAAGATCAGGCTAAACCGTTTACAGTAGGGAATTTCATGAAGGGGACTTGGATCATAAGCAGTGTCCCTGTTCAGATAGGATTCTATCATTG 1817 0.4507 MAFQDFDLISDRRKEERKQKIKKRIMIAVVSILVLIGLAAAAVFVLVEQNKNAGEKNENAGKGKEKKESPSTEHDSDSKDGLRGQKMVKTLCSSTDFKSKCETSLGNASKGDPKLNQPKDLLEVAIKAAEEAINKAFDKSKSLKFESEKDKGAFEDCKQLIEDAKEEIGFSLSEVGKDDLKTLVNKTDDVSNWLSAVISYHETCIDGFPDGKLKTDIKNIFKDPKEFVSNALAIMSDVASLLSTFQSITVTTARHLLEDKASSPADALGKDGLPDWMGDDQRRVLKAADDKPTPNVTVAKDGSGQFKTISEALAAIPEKYEGRYVVYVKEGVYEETVTITKKMVNITLYGDSSQKSIITGSKNFVDGVRTFQTATFVVLGEGFLGKAMGFRNTAGPEKHQAVAVRVQADRAVFVNSRFEGYQDTLYTQTHRQFYRSCVISGTVDFIFGDAAAVFQNCIISLRKPLDNQQNIVTAQGRIDKRETTALVLQNCQIKADDKLVPDKAKIKSYLGRPWKEYSTTIVMESEIEDVIHPDGWLPWEGDFALKTLFYGEFNNTGPGASTSARVKWPGYKVLTKDQAKPFTVGNFMKGTWIISSVPVQIGFYH 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00463 605 SMART PMEI_2 83 234 IPR006501 GO:0004857
Bva06g00463 605 PANTHER PECTINESTERASE 14 603 - -
Bva06g00463 605 TIGRFAM PME_inhib: pectinesterase inhibitor domain 83 236 IPR006501 GO:0004857
Bva06g00463 605 PANTHER PECTINESTERASE 14 603 - -
Bva06g00463 605 Pfam Pectinesterase 295 590 IPR000070 GO:0030599|GO:0042545
Bva06g00463 605 Gene3D - 289 603 IPR012334 -
Bva06g00463 605 Pfam Plant invertase/pectin methylesterase inhibitor 87 234 IPR006501 GO:0004857
Bva06g00463 605 Coils Coil 119 139 - -
Bva06g00463 605 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 85 236 IPR035513 -
Bva06g00463 605 MobiDBLite consensus disorder prediction 55 84 - -
Bva06g00463 605 MobiDBLite consensus disorder prediction 54 85 - -
Bva06g00463 605 Gene3D Invertase/pectin methylesterase inhibitor family protein 84 238 IPR035513 -
Bva06g00463 605 SUPERFAMILY Pectin lyase-like 293 598 IPR011050 -
Bva06g00463 605 CDD PMEI-like_3 90 236 - -
Bva06g00463 605 ProSitePatterns Pectinesterase signature 2. 439 448 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00463 Bva-Chr6 5361103 5363972 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00463 1 604 Carbohydrate Esterase AT2G26450 48.248 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00463 - - gmx:100784679 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01173 05 6080843 6083433 Bva06g00463 06 5361103 5363972 BWGD
Bva06g00463 06 5361103 5363972 Bva06g00463 06 5361103 5363972 ECH