Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00462 ATGGCTTCCTCGTCACATAAACTCTTCTTCATTCTCTTGTTGATAATCTTCTTATCACAAACTTTGACTGTGAAATCCTCCAATTTTTCCACAACCACTTTTCATtctaatttctcttccttaagATCTTTCTGCAGATCCACTCCATACCCAGATGCATGTTTCAATTCATTAAAGCTCTccatttcaattaatatagGGCCAAACATCCTCAACTTCCTCCTTCAGTCCCTCCAAGTAGCAATCTCTGAAGCAACAAAGCTTTCGGATTTGTTCTACAAAGCTGGACTCAAAAACATCATTGAGAAGCAAAGAGGAGCAATCCAAGACTGCAAAGAGCTTCACCAATCCACCTTGACCTCTTTGAAGAGATCACTATCTGGGATTCGTGCAGCAAACCACAATAAGTTAGCAGATGCAAGAGCCTACCTCAGCGCAGCACTAACCAATAAGAACACATGCTTGGAAGGACTTGACTCTGCTTCTGGTTCCCTGAAGCCAGTTATAGTCAACTCCATGATTAACGCTTACAAGCATGTAAGCAATTCTCTCTCAATGCTTTCCAAGCCGGGCATAAGGGTTCCAAAAGGCCGCAAGAACAGGCGTTTGATGGGTGTTCCTGCATGGCTTTCAAGCAAAGACCACCGCTTGTTGCAGAGTAATGACCAGGGTGAATACAGTATTGTTGTGGCTGCAGATGGAACAGGGAACTTCACCACCATCAGTGAAGCTATTAACTTTGCTCCAAATAACAGCTTTGATAGGACTATAATCTATATTAGACAAGGGGTTTATATAGAAAATGTGGAAATCCCAAGTTATAAGACTAACATTGTTCTGCTTGGAGATGGAAGTGATGTCACTTTCATTACTGGTAACAGAAGCGTCGTTGATGGCTGGACCACCTTCAGATCCGCCACTCTAGCTGTTTCTGGTGAGGGCTTTCTGGCACGTGATATAGCGATTGAGAACAGTGCAGGGCCAGAGAAGCATCAAGCTGCAGCCTTGAGAGTAAACGCTGACTTCACTGCCTTTTATAGGTGTGCCATTTATGGTTACCAAGACACTCTTTACGTCCACTCCTTTAGGCAATTCTACAGAGAGTGTGACATCTACGGCACCATAGATTTCATATTTGGCAATGCAGCTGTGGTCTTCCAAGACTGTGACATTATATCGAGAAAGCCATTACCAGGCCAATTCACTGTGATTACAGCACAATCCAGAGATACCCCAGATGAGGATACTGGAATCTCAATCCAGAATTGCTCTATTATAGCCACTGACGATCTGTATAACAGCTCTGGCAGCTTCAAGAACTACCTGGGAAGGCCATGGAGGAACTATTCTAGGACTGTGTTCCTTGAATCCTATATTGATAACTTTATCGACCCGACTGGGTGGACAAAGTGGGTTGATGATCAAGGCTTGGACACTTTGTATTATGGAGAGTATCAGAATTATGGGCCTGGTTCTGGTGTGAATAACAGAGTAACTTGGCCAGGGTACCATGTAATGGGTTATCAGGATGCTTATAATTTCACAGTTTCAGAGCTCATTGCAGGTGATGTATGGCTTGAGTCTACATCATTTCCTTACGATGATGGAATTTG 1613 0.4253 MASSSHKLFFILLLIIFLSQTLTVKSSNFSTTTFHSNFSSLRSFCRSTPYPDACFNSLKLSISINIGPNILNFLLQSLQVAISEATKLSDLFYKAGLKNIIEKQRGAIQDCKELHQSTLTSLKRSLSGIRAANHNKLADARAYLSAALTNKNTCLEGLDSASGSLKPVIVNSMINAYKHVSNSLSMLSKPGIRVPKGRKNRRLMGVPAWLSSKDHRLLQSNDQGEYSIVVAADGTGNFTTISEAINFAPNNSFDRTIIYIRQGVYIENVEIPSYKTNIVLLGDGSDVTFITGNRSVVDGWTTFRSATLAVSGEGFLARDIAIENSAGPEKHQAAALRVNADFTAFYRCAIYGYQDTLYVHSFRQFYRECDIYGTIDFIFGNAAVVFQDCDIISRKPLPGQFTVITAQSRDTPDEDTGISIQNCSIIATDDLYNSSGSFKNYLGRPWRNYSRTVFLESYIDNFIDPTGWTKWVDDQGLDTLYYGEYQNYGPGSGVNNRVTWPGYHVMGYQDAYNFTVSELIAGDVWLESTSFPYDDGI 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00462 537 Pfam Plant invertase/pectin methylesterase inhibitor 40 186 IPR006501 GO:0004857
Bva06g00462 537 CDD PMEI-like_3 43 190 - -
Bva06g00462 537 PANTHER PECTINESTERASE 8 536 - -
Bva06g00462 537 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 188 IPR006501 GO:0004857
Bva06g00462 537 SUPERFAMILY Pectin lyase-like 227 534 IPR011050 -
Bva06g00462 537 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 189 IPR035513 -
Bva06g00462 537 Gene3D - 222 537 IPR012334 -
Bva06g00462 537 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 189 IPR035513 -
Bva06g00462 537 SMART PMEI_2 36 186 IPR006501 GO:0004857
Bva06g00462 537 ProSitePatterns Pectinesterase signature 2. 371 380 IPR033131 -
Bva06g00462 537 PANTHER PECTINESTERASE 8 536 - -
Bva06g00462 537 Pfam Pectinesterase 228 523 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00462 Bva-Chr6 5358169 5359950 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00462 39 537 Carbohydrate Esterase AT2G26440 69.006 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00462 - - gmx:100776969 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00462 06 5358169 5359950 Bva06g00462 06 5358169 5359950 ECH