Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00461 atggctttttcttcaaaacaaATACTCACTATCACATTCTTGCATTTGGCGCTGGTTCTCAGTTTTTGCACCCCATTAGCATTAGGCACTACTGTTGATGGCCCTGATTTCGTAGAGCCAGGGTTCCTAAAAGTTGCTGCTTCTGAATTTGTTGGCTCTGTAAGGGAAGTGATTGATGTTTTGCAACAAGTTGTTTCCATTTTGTCTCAGTTCGGCAACGGTTTTGGCGATTTCCGTGCTTCCAATGCCATTTCTGATTGTCTAGATTTGCTTGACTTGTCTTCTGACGAGCTCAGCTGGACTGCATCTGCTACTCAGAGCCCCACAGGCGAGCATAACAGCACAGGGAAGTTAGGTTCTGATTTGAGAACATGGTTGAGTGCTGCACTTGCAAATCCAGAGACATGCACGGAGGGATTTGAAGATAGTGATAGCATTGTGCAAACTCTGATATCCGGAGGGTTAAGCCAAATGACCTCATTGATCCAAGAGCTTCTGACCCAGGTGCACCCTGGTTCAGACACTTTTCCCAAACAAAATGGTCAATTTCCTTCCTGGGTTAAACCAGGGGACAGGAAGTTACTACAAGCAAATGGGGTGCCTGTAGATGTTGTGGTAGCAGCTGATGGCACTGGGAATTTCACTAAGGTAATGGATGCAGTGCTTGCTGCACCAAATTATAGCATGAAGCGCTAtgttatatacataaaaaggGGTATTTACAGAGAGAACGTGGagatcaagaagaagaagtggaACCTCATGATGATTGGGGATGGCATGGATGCTACCGTTATCTCCGGTAACCGGAGTTACATCGACGGTTGGACCACTTTCCGATCAGCTACCTTTGCTGTTAGTGGCAGAGGGTTCATAGCACGACAACTTTCCTTCGAGAACACTGCAGGGCCCGAGAAACACCAAGCAGTGGCGCTGAGATCCGATTCTGACCTCTCAGTATTCTACCGATGCGGGATTTTTGGTTACCAAGACACCCTTTACGCCCACACCATGCGCCAATTCTACAGAGAATGCAAAATAAGTGGCACTGTGGATTTCATTTTCGGCGATGCCACCGCACTGTTCCAAAACTGCGAAATACTTGCCAAGAAAGGTTTACCAAATCAGAAAAACACCATCACAGCACATGGTCGCAAAATCGCAGATGAGCCAACGGGTTTCTCCATCCAATTCTGCAACATTTCTGCAGATTCTGACCTTCTACCCTTTCTAAACTCCACCCTAACTTACCTCGGCAGGCCTTGGAAGCAATTTTCTCGAACAGCTATCATGCAATCTCATTTGAGCAATGTGTTGAGGCCAGAAGGGTGGCTGGAATGGAATGGAACATTTGCTTTGGACACATTGTATTATGCGGAGTACATGAATTATGGGCCAGGAGCTGGTTTAGCTAACAGGATCAAGTGGGCAGGATACCATGTGCTCAATAGTACTGATCAAGCCAATAACTTCACCGTGGCACAGTTTATTGACGGGAATCTATGGTTACCTTCTACAGGTGTGGCCTTCACGGCAGGATTGGAGATATA 1550 0.4497 MAFSSKQILTITFLHLALVLSFCTPLALGTTVDGPDFVEPGFLKVAASEFVGSVREVIDVLQQVVSILSQFGNGFGDFRASNAISDCLDLLDLSSDELSWTASATQSPTGEHNSTGKLGSDLRTWLSAALANPETCTEGFEDSDSIVQTLISGGLSQMTSLIQELLTQVHPGSDTFPKQNGQFPSWVKPGDRKLLQANGVPVDVVVAADGTGNFTKVMDAVLAAPNYSMKRYVIYIKRGIYRENVEIKKKKWNLMMIGDGMDATVISGNRSYIDGWTTFRSATFAVSGRGFIARQLSFENTAGPEKHQAVALRSDSDLSVFYRCGIFGYQDTLYAHTMRQFYRECKISGTVDFIFGDATALFQNCEILAKKGLPNQKNTITAHGRKIADEPTGFSIQFCNISADSDLLPFLNSTLTYLGRPWKQFSRTAIMQSHLSNVLRPEGWLEWNGTFALDTLYYAEYMNYGPGAGLANRIKWAGYHVLNSTDQANNFTVAQFIDGNLWLPSTGVAFTAGLEI 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00461 516 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 54 153 IPR035513 -
Bva06g00461 516 SUPERFAMILY Pectin lyase-like 200 513 IPR011050 -
Bva06g00461 516 Pfam Plant invertase/pectin methylesterase inhibitor 80 160 IPR006501 GO:0004857
Bva06g00461 516 SMART PMEI_2 46 168 IPR006501 GO:0004857
Bva06g00461 516 ProSitePatterns Pectinesterase signature 1. 228 247 IPR018040 -
Bva06g00461 516 ProSitePatterns Pectinesterase signature 2. 347 356 IPR033131 -
Bva06g00461 516 Gene3D - 199 514 IPR012334 -
Bva06g00461 516 CDD PMEI-like_4 14 173 - -
Bva06g00461 516 Pfam Pectinesterase 203 500 IPR000070 GO:0030599|GO:0042545
Bva06g00461 516 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 170 IPR035513 -
Bva06g00461 516 PANTHER PECTINESTERASE 45 514 - -
Bva06g00461 516 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 45 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00461 Bva-Chr6 5353374 5356015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00461 6 514 Carbohydrate Esterase AT3G43270 61.568 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00461 K01051 - gmx:100777500 765.763