Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00455 ATGGGCTTCTACATTGAAGAGTCAATCTCTGGTTTTACTATAGGCCAGGCAATTTATGAAGTAGCTCTTATAATTGCAGTTCTGAGATGGGTTTTGTGCTGGGTTTTCAGAATGATCAAAGATAGAAGGCACAGTTCTCTTGAAACCTCAACTGagccttcttcttcttgtacttCATGTGTTTCTTCCCTGATGATAAGAGACAGCACTCTGATTCTTACTACTTTTGGTGAGATTGTGAAGAGAATGCCAGAGACAGAGGACACTTGTGCTGTGTGCTTGAACCAGCTGAAAATGGAAGATGAGGTGAGGGAACTGATGAATTGCGACCATGTGTTCCATAGGGAATGCATAGATAGATGGTGGGATCATGACCATGACAATCACAATCCCACTTGTCCACTCTGCAGAGCCCCTCTTCTTCTAACTCCTTGTCCTTCAACAGAAAGCTCCAGCTGCTTGCCTCCCCCTCAGCCCAGCTGGGCTGTGGAGAGACTTCTCTATCTCTTTGGGGATGATCTGCTTCCGTA 530 0.4377 MGFYIEESISGFTIGQAIYEVALIIAVLRWVLCWVFRMIKDRRHSSLETSTEPSSSCTSCVSSLMIRDSTLILTTFGEIVKRMPETEDTCAVCLNQLKMEDEVRELMNCDHVFHRECIDRWWDHDHDNHNPTCPLCRAPLLLTPCPSTESSSCLPPPQPSWAVERLLYLFGDDLLP 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00455 176 SUPERFAMILY RING/U-box 85 143 - -
Bva06g00455 176 Pfam Ring finger domain 88 137 IPR001841 -
Bva06g00455 176 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 141 IPR013083 -
Bva06g00455 176 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 176 - -
Bva06g00455 176 ProSiteProfiles Zinc finger RING-type profile. 90 137 IPR001841 -
Bva06g00455 176 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 176 - -
Bva06g00455 176 SMART ring_2 90 136 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00455 Bva-Chr6 5313211 5314036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00455 1 174 C3H Transcription Factor Family AT5G20885 48.148 6.10e-44 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00455 K16281 - gmx:100306203 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00455 06 5313211 5314036 Bva06g00455 06 5313211 5314036 ECH