Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00453 ATGGAAGGAAAGCTTGAAGCCGAAGGTGTGAGGGCCGAGGCTGAGGAATTTGAAGAAGgagagaaagaacaaaacttGGGTCTAGAATCTTCCCCTGTTTCTGCAAATCTCGGTGATAGCGTTTATTGGGACAATAACAGCAGCGAGAAACCTCAGGAAATGGGTTCAGTGGGAGAGGGGAAAGAGACAGTTGACAAAGCAGCTGGGAACAACGTGGGTGATGGGTCAAACGCACAATTCTCAGCAAACAGGAATCAGCTtaccattttctttaatgGGAGTATTTGTGTCTATGATGGGATTCCTGCAGAGAAGGTGCAAGAAATAATGCTTATTGCTAAGTCTGCTCAAATGAAGAAGGTTCCCTCACAATCCGAGTTCACTTCACCCATTGCCACAAGGCCATCTTCTCCACAAGGAACTGCTAATAATGCAGCTTCACCGCAGGCCCTCTGCTTGCCTGCTCATAAGAGTTCCATTTGCAGATTGCAAGAATTTCCAATTGCACGCAGACACTCTCTTCAGCGGTTCCTTGAGAAGCGTCGAGACAGGTTGGGAAGTAAAGCTCCTTATCCAACCCCATCAACACCAAAAATGGCTGATAACATGGACAACAACTTCTGTGCTGAAAATGCTCCAGAGTTGGTTTCCTTCAAACATTCAGAGGAGGAATTTCAACCAAGTCTTGTTGCCTCTTG 698 0.4456 MEGKLEAEGVRAEAEEFEEGEKEQNLGLESSPVSANLGDSVYWDNNSSEKPQEMGSVGEGKETVDKAAGNNVGDGSNAQFSANRNQLTIFFNGSICVYDGIPAEKVQEIMLIAKSAQMKKVPSQSEFTSPIATRPSSPQGTANNAASPQALCLPAHKSSICRLQEFPIARRHSLQRFLEKRRDRLGSKAPYPTPSTPKMADNMDNNFCAENAPELVSFKHSEEEFQPSLVAS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00453 232 MobiDBLite consensus disorder prediction 1 25 - -
Bva06g00453 232 MobiDBLite consensus disorder prediction 1 79 - -
Bva06g00453 232 MobiDBLite consensus disorder prediction 180 206 - -
Bva06g00453 232 Pfam Jas motif 167 191 IPR018467 -
Bva06g00453 232 MobiDBLite consensus disorder prediction 27 53 - -
Bva06g00453 232 MobiDBLite consensus disorder prediction 123 145 - -
Bva06g00453 232 SMART tify_2 80 115 IPR010399 -
Bva06g00453 232 ProSiteProfiles Tify domain profile. 80 115 IPR010399 -
Bva06g00453 232 PANTHER PROTEIN TIFY 3A-RELATED 71 210 - -
Bva06g00453 232 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 71 210 IPR040390 -
Bva06g00453 232 Pfam tify domain 82 113 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00453 Bva-Chr6 5303117 5305425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00453 53 193 Tify Gene Family AT5G20900 46.853 3.43e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Bva06g00453 tify 2.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00453 K13464 - gmx:100306045 207.608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01183 05 6146686 6148928 Bva06g00453 06 5303117 5305425 BWGD