Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00444 ATGGAATTAACTGCAGAAGCATTTGATGTTTGCCATACCaactcatcatcttcttcatcatcttcaattGACAGCAGTAATCACCCTTCTGCCATTGCCAGACCAGCTTCATCGTCTTCCTCAAGCGTGTGCAGAAACTACAGCAGCATCAGAATGGATTTGAGCACTGACCTTAGTCTTGGTCTGAGCATCAGCACCTCACCTTCTTCCAATTCAATTCCGAGgGAGCAAAGTTTGGATTGGCCACCGATTAAATCAACATTGAGGAGCACACTGGTTGAGAGAAACAGCCAACTGAGGCAACAACCCTTCTTATTTGTCAAAGTTTACATGGAAGGCATTCCAATTGGTagaaaattgaatcttttggCACACCATGGTTATGATGATCTAGTTAGAGCTCTTGGCCAAATGTTTAAGACCACCATTCTTTGTCCTAATTCTCAACCACTTCATTCTGGGAATTTCCATGTGTTAACTTTTGAGGATCAAGAGGGAGATTGGATGATGGTTGGAGATGTGCCATGGGAGATGTTCTTGAACAATGTGAAAAGGTTGAAGATCACAAGAGCAAACAGATGCTA 584 0.3973 MELTAEAFDVCHTNSSSSSSSSIDSSNHPSAIARPASSSSSSVCRNYSSIRMDLSTDLSLGLSISTSPSSNSIPREQSLDWPPIKSTLRSTLVERNSQLRQQPFLFVKVYMEGIPIGRKLNLLAHHGYDDLVRALGQMFKTTILCPNSQPLHSGNFHVLTFEDQEGDWMMVGDVPWEMFLNNVKRLKITRANRC 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00444 194 MobiDBLite consensus disorder prediction 9 43 - -
Bva06g00444 194 Gene3D - 99 194 - -
Bva06g00444 194 ProSiteProfiles PB1 domain profile. 104 193 IPR000270 GO:0005515
Bva06g00444 194 SUPERFAMILY CAD & PB1 domains 97 188 - -
Bva06g00444 194 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 17 194 IPR003311 GO:0005634|GO:0006355
Bva06g00444 194 MobiDBLite consensus disorder prediction 1 43 - -
Bva06g00444 194 PANTHER AUXIN-RESPONSIVE PROTEIN IAA31 17 194 - -
Bva06g00444 194 Pfam AUX/IAA family 59 190 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00444 Bva-Chr6 5263385 5264486 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00444 108 188 B3 DNA Binding Superfamily AT4G23980 40.741 4.51e-13 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bva06g00444 AUX_IAA 3.4e-32 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00444 K14484 - gmx:100818083 233.417