Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00426 atggcaGAGGAGACTAGCTTGGATGGAGCTATTAGCACACATGAGACAACAAGGCCAAGTGAGCAACCTGATACTAACAAGAAACAAGATTCAGATAAGGGCAAAGGCGAAGATGAAAGCAAGAACACAGTACCCTTTTACAAACTCTTCACATTTGCAGACTCTTTAGATCGTTTATTGATGACTGTAGGGACTATAGCTGCTATGGGAAATGGAGTCACTATGCCCTTAATGACTATAATTATGGGAGATTTAATCGATTCTTTTGGAAAAGATTCCAAAATGGTTATGCATGGGGTTTCAAAGGTGGCTCTGAGGTTTGTATACTTGGCTATGGGTGCCTTTGCTGCGGCATTTCTCCAGGTTACTTGCTGGATGGTCACTGGGGAGAGACAGGCTGCAACAATACGAAGTTTATATCTCAAGACAATTCTGAGGCAAGATGTGAGCTTCTTTGATAAGGAAACAAACACTGGAGAGGTTATTGGAAGGATGTCAGGAGATACTGTCCTTATTCAAGATGCCATGGGAGAAAAggTTGGACAGTTCATACAGTTCATGGCAACTTTCCTGGGGGGATTCATCATAGCATTCATCAAGGGATGGCTTCTAACCCTTGTCATGCTATCTTCTATTCCACCTCTTGTCATTGCTGGTGCTGCAATGGCCTTTGCTATAGGAAAGACAGCATCGCGTGGACAAACAGCTTATTCTGCAGCAGCAACTGTAGTAGAGCAGACAATTGGTTCTATTCGAACAGTTGCATCGTTTACTGGGGAAAAGCAAGCAATAACTAAATATAACCAGTCGTTAATGAAAGCTTACCAGAATAGTGTGCAAGAGGGACTGGCTTCAGGTTTCGGAATAGGCTTCCTTTTCTTGATTATTTTCTGCAGTTATGGTTTGGCTACTTGGTATGGTGGGAAAATGATACTAGAGAAAGGATATACAGGAGGTGAGGTCGTGAATGTAATCTTTGCAGTACTGACTGGCTCCTTGTCTCTTGGCCAGGCTTCTCCATCCCTGAGTGCATTTGCTGCAGGACAAGCTGCTGCATTTAAGATGTTTGAAACGATTGAAAGAAGGCCAGAGATTGATGCTTATGACACAAATGataaagaaatcaaagctGCAGCAGAGCTTGCTAATGCAGCTAAGTTCATCGATAAACTTCCTCAGGGACTAGACACAATGGTTGGTGAGCATGGAACTCAGCTCTCTGGGGGTCAAAAGCAAAGAGTTGCAATAGCAAGAGCAATCTTGAAGGATCCACGGATTCTCCTTCTTGATGAAGCTACAAGTGCTCTTGATGCTGAATCTGAGAGAATAGTGCAGGAGGCGCTTGACAGAATCATGATAAATCGAACTACTGTCATTGTAGCACATCGCTTAAGTACTATAAGGAATGCTGATGTTATTGCCGTCATTCATCAAGGGAAAATAGTAGAAAAAgGTTCACATGCTGAGCTGACAAtgaagttcatgaaaggATTCAGTGCAGATGCAAAGaaaatGTATGAGAAAGCAAGTCAAGTTGCAAATGATGCTGTAGGGAGTATTAGAACAGTTGCTTCCTTCTGTGCTGAAGAGAAAGTGATGGAGTTATACCAGAAGAAATGTGAAGGACCAATTAAGACAGGAATAAGACAAGGGATCATAAGTGGAACTAGTTTTGGTCTATCATTGTTCTTGCTCTATACTGTCTATGCAACCAGTTTTTATGCTGGAGGCCGACTTGTAGAAGATGGTAAAGTATCATCCAAAGATGTTTTTCGAGTCTTCTTTGCTCTCACTATGGCTGCTATAGCACTCTCTCAATCTAGCACCTTGGCTCCTGATTCAGGAAAAGCAAAAGTTTCTGCTGCATCTATATTTGCAATTCTAGATAGGAAATCAAAAGTAGATCCCAGTGATGAATCTGGTACGATATTGGAAAACGTAAAAGGAGAAGTTGAGTTTGTCCATGTCAGTTTCAAGTATCCCACCAGACCTGATGTTCAAATATTCAGAGATCTTAGCTTGGCCATTCACTCAGGAAAGACAGTGGCTCTGGTTGGAGAAAGTGGAAGTGGAAAGTCTACTGTGATATCATTATTACAGAGATTTTATGACCCAGATTCAGGTCACATTACACTGGATGGAGTTGAAATCCAGAAGCTACAAGTTAAATGGTTAAGGCAGCAAATGGGGTTGGTAAGCCAGGAGCCTGTGTTGTTTAATGACACCATCCGAGCGAATATTGCCTATGGAAAGGGTGGAGATGCAACAGAAGCAGAAATCATAGCTGCAGCAGAACTGGCAAATGCTCACAAGTTCATTAGTAGTTTGCAGCAGGGTTATGACACTACAGTAGGGGAGCGAGGAATTCAATTATCTGGAGGACAGAAGCAAAGGGTGGCAATTGCAAGAGCCATTGTGAAGAATCCAAAAATATTGCTACTAGATGAAGCTACAAGTGCTCTTGATGCTGAGTCTGAAAAAGTGGTTCAAGATGCATTGGACAGAGTCATGGTGGACCGAACCACAATTGTGGTGGCCCATAGGTTGTCTACTATTAAGGGTGCAGATTTAATTGCAGTGATTAAAAATGGAGTCatagaagagaaaggaaagcatGAAACTTTGCTCAAGAAAGGTGGTGGCTATGCTTCCTTGGCTGCATTACACACAAGTGCATCTTCATCTTA 2687 0.4131 MAEETSLDGAISTHETTRPSEQPDTNKKQDSDKGKGEDESKNTVPFYKLFTFADSLDRLLMTVGTIAAMGNGVTMPLMTIIMGDLIDSFGKDSKMVMHGVSKVALRFVYLAMGAFAAAFLQVTCWMVTGERQAATIRSLYLKTILRQDVSFFDKETNTGEVIGRMSGDTVLIQDAMGEKVGQFIQFMATFLGGFIIAFIKGWLLTLVMLSSIPPLVIAGAAMAFAIGKTASRGQTAYSAAATVVEQTIGSIRTVASFTGEKQAITKYNQSLMKAYQNSVQEGLASGFGIGFLFLIIFCSYGLATWYGGKMILEKGYTGGEVVNVIFAVLTGSLSLGQASPSLSAFAAGQAAAFKMFETIERRPEIDAYDTNDKEIKAAAELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMINRTTVIVAHRLSTIRNADVIAVIHQGKIVEKGSHAELTMKFMKGFSADAKKMYEKASQVANDAVGSIRTVASFCAEEKVMELYQKKCEGPIKTGIRQGIISGTSFGLSLFLLYTVYATSFYAGGRLVEDGKVSSKDVFRVFFALTMAAIALSQSSTLAPDSGKAKVSAASIFAILDRKSKVDPSDESGTILENVKGEVEFVHVSFKYPTRPDVQIFRDLSLAIHSGKTVALVGESGSGKSTVISLLQRFYDPDSGHITLDGVEIQKLQVKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIIAAAELANAHKFISSLQQGYDTTVGERGIQLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVVQDALDRVMVDRTTIVVAHRLSTIKGADLIAVIKNGVIEEKGKHETLLKKGGGYASLAALHTSASSS 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00426 895 Pfam ABC transporter transmembrane region 491 601 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva06g00426 895 Pfam ABC transporter transmembrane region 61 333 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva06g00426 895 PIRSF ABC_prm/ATPase_B 3 371 - -
Bva06g00426 895 PIRSF ABC_prm/ATPase_B 366 496 - -
Bva06g00426 895 PIRSF ABC_prm/ATPase_B 491 895 - -
Bva06g00426 895 ProSitePatterns ABC transporters family signature. 406 420 IPR017871 GO:0005524
Bva06g00426 895 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 63 347 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva06g00426 895 Gene3D ABC transporter type 1, transmembrane domain 48 371 IPR036640 GO:0005524|GO:0016021
Bva06g00426 895 SUPERFAMILY ABC transporter transmembrane region 491 635 IPR036640 GO:0005524|GO:0016021
Bva06g00426 895 SMART AAA_5 678 872 IPR003593 -
Bva06g00426 895 SMART AAA_5 192 466 IPR003593 -
Bva06g00426 895 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 374 490 - -
Bva06g00426 895 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 1 373 - -
Bva06g00426 895 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 641 887 IPR027417 -
Bva06g00426 895 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 368 491 IPR027417 -
Bva06g00426 895 MobiDBLite consensus disorder prediction 20 40 - -
Bva06g00426 895 ProSitePatterns ABC transporters family signature. 791 805 IPR017871 GO:0005524
Bva06g00426 895 CDD ABC_6TM_Pgp_ABCB1_D1_like 61 343 - -
Bva06g00426 895 PANTHER - 1 373 - -
Bva06g00426 895 MobiDBLite consensus disorder prediction 1 40 - -
Bva06g00426 895 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 490 616 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva06g00426 895 SUPERFAMILY ABC transporter transmembrane region 48 366 IPR036640 GO:0005524|GO:0016021
Bva06g00426 895 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 184 503 IPR003439 GO:0005524
Bva06g00426 895 Gene3D - 374 491 IPR027417 -
Bva06g00426 895 Gene3D - 641 890 IPR027417 -
Bva06g00426 895 Pfam ABC transporter 670 819 IPR003439 GO:0005524
Bva06g00426 895 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 492 891 - -
Bva06g00426 895 PANTHER - 374 490 - -
Bva06g00426 895 PANTHER - 492 891 - -
Bva06g00426 895 Gene3D ABC transporter type 1, transmembrane domain 493 891 IPR036640 GO:0005524|GO:0016021
Bva06g00426 895 Pfam ABC transporter 379 434 IPR003439 GO:0005524
Bva06g00426 895 CDD ABC_MTABC3_MDL1_MDL2 651 886 - -
Bva06g00426 895 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 651 888 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00426 Bva-Chr6 5190315 5195342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00426 495 892 Calmodulin-binding Proteins AT2G36910 47.500 1.04e-108 362