Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva06g00425 | ATGTATCCAAAAGTTAATcatgttgaagaagaagaaagcttttCCTATGCTATGCAACTGGCCAGGTCAATGGCGCTTCCCATGGTCTTGAAAACTGCTGTTGAGCTAAAGGTGTTTGATATAATTGCTACGTCAGATCCAGATGCCAAGCTCTCTGCAGTGGACATTGCTACCCAGATTACCAGCAAGAACCCAGAAGCAGCTACTATGTTAGATCGCATCCTCAGGCTCCTAGCCACTCACTCTGTGCTTCATTGCTCTCTTGTTGAAGATCAACAAAAGCTTGGTTCTTTCCAGAGGCTTTACAGCCTAAACTCCGTGTCTAAATATTTTGTGCTTGACGATGATGGGATGTCATTGGGGAACTACACGGCCTTGGTTCAGCACAAGGTCATCTTGGACAGCTGGTCCCAATTGAAAGAGGCAGTTGTAGAAGGGGGTATTCCATTCAACAGAGCTCATGGCTGCCATGCCTTTGAGTACCTAGGCTTGGATGCCAAGTTTAATGGAGTTTTCAACACTGCAATGGTAAGTCTTACCACTATGGTTATGAAGAAGATTCTTGAAGTCTATAATGGTTTTGAGAATATTAGTACACTGGTGGATGTTGGTGGGGGTCTTGGGCTCACCATTAACTTGATCGTTTCCAAATACCAACATATCCATGGTATCAATTTCGATTTGGCTCATGCCATTCAACATGCACCTCCCTATCCTGGTGTGGAACACGTTAAAGGAGACATGTTTGAAAGTGTGCCCAAAGGAGATGCTATAATTATGAAGTGGGTACTTCATGATTGGAGTGATGAAAGGTGCTTGAAAGTGTTGAAAAAATGCTACGATGCTATTCCTCAAAATGGAAAGGTAATTGTTGTGGAGGCGGTAGTTCCTGGTTTACCCGAGACCAACGCCGCTGCAAAGAACGTCTCTCACCTAGACATTCAAATGATGACCATAAACCCAGGTGGGAAAGAGCGAACTAAGCAAGAATTCATCGAATTGGCAACAACAGCTGGATTTAGGGCTGCTAAATTTGACTGCTACGTCTATAATCAATGGATTATAGAGTTCTTCAAGTA | 1079 | 0.4263 | MYPKVNHVEEEESFSYAMQLARSMALPMVLKTAVELKVFDIIATSDPDAKLSAVDIATQITSKNPEAATMLDRILRLLATHSVLHCSLVEDQQKLGSFQRLYSLNSVSKYFVLDDDGMSLGNYTALVQHKVILDSWSQLKEAVVEGGIPFNRAHGCHAFEYLGLDAKFNGVFNTAMVSLTTMVMKKILEVYNGFENISTLVDVGGGLGLTINLIVSKYQHIHGINFDLAHAIQHAPPYPGVEHVKGDMFESVPKGDAIIMKWVLHDWSDERCLKVLKKCYDAIPQNGKVIVVEAVVPGLPETNAAAKNVSHLDIQMMTINPGGKERTKQEFIELATTAGFRAAKFDCYVYNQWIIEFFK | 359 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva06g00425 | 359 | PANTHER | O-METHYLTRANSFERASE | 10 | 359 | IPR016461 | GO:0008168 | |
| Bva06g00425 | 359 | CDD | AdoMet_MTases | 199 | 292 | - | - | |
| Bva06g00425 | 359 | Gene3D | - | 2 | 111 | IPR036388 | - | |
| Bva06g00425 | 359 | PANTHER | CAFFEIC ACID O-METHYLTRANSFERASE | 10 | 359 | - | - | |
| Bva06g00425 | 359 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 18 | 359 | IPR016461 | GO:0008168 | |
| Bva06g00425 | 359 | PIRSF | O-mtase | 2 | 359 | IPR016461 | GO:0008168 | |
| Bva06g00425 | 359 | Pfam | Dimerisation domain | 28 | 79 | IPR012967 | GO:0046983 | |
| Bva06g00425 | 359 | Pfam | O-methyltransferase domain | 136 | 341 | IPR001077 | GO:0008171 | |
| Bva06g00425 | 359 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 117 | 357 | IPR029063 | - | |
| Bva06g00425 | 359 | Gene3D | Vaccinia Virus protein VP39 | 113 | 359 | IPR029063 | - | |
| Bva06g00425 | 359 | SUPERFAMILY | "Winged helix" DNA-binding domain | 9 | 112 | IPR036390 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva06g00425 | Bva-Chr6 | 5185864 | 5187624 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bva06g00425 | 7 | 359 | Monolignol Biosynthesis Gene Families | AT5G54160 | 49.859 | 4.15e-131 | 377 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bva06g00425 | K13066 | - | zju:107423770 | 458.373 |