Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00424 ATGCATTCTCCAAAACTTAATAATGTGcaacaagaagaaagctaTTCCTACGCTATGCAGCTAGCTAGGTCAATAGCTCTTCCTATGGTCTTGCACGCTGCTACTGAGCTAAAGGTGTTTGATATAATTGCTAAATCAGGTCCAGATGCAAAGCTCTCTGCAGTGGACATTGCTGCCCAGATTACCAGCAAGAACCCAGAAGCAGCTACTATGCTAGACCGTGTGGAACATGTGGAAGGAGACATGTTTGAAAATGTGCCCAAAAGGAGATGCTATATTTATGAAGATAGTGGATACTTCATGATTGGAGTGATGAAATTTGCCTTAAAAGTGTTGAAGAATTGCTATGATGCTGTTCCTCAAGATGGAGAAGTGATTGTTGTGGAGACAATTCTTCCTGTTTTATTTGAGACTAAAGCTGCTGCGAAGAACAATTCCCAGCTTGATATTGAATCGATGGTAAACGTAGGTGAGAAAGAGCGAACTGAACAAGAATTCAGAGTTGGCAACAGTAACTG 518 0.3996 MHSPKLNNVQQEESYSYAMQLARSIALPMVLHAATELKVFDIIAKSGPDAKLSAVDIAAQITSKNPEAATMLDRVEHVEGDMFENVPKRRCYIYEDSGYFMIGVMKFALKVLKNCYDAVPQDGEVIVVETILPVLFETKAAAKNNSQLDIESMVNVGEKERTEQEFRVGNSN 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00424 172 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 75 167 - -
Bva06g00424 172 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 13 75 - -
Bva06g00424 172 Gene3D Vaccinia Virus protein VP39 76 167 IPR029063 -
Bva06g00424 172 PANTHER O-METHYLTRANSFERASE 75 167 IPR016461 GO:0008168
Bva06g00424 172 Gene3D - 2 75 IPR036388 -
Bva06g00424 172 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 172 IPR016461 GO:0008168
Bva06g00424 172 PANTHER O-METHYLTRANSFERASE 13 75 IPR016461 GO:0008168
Bva06g00424 172 Pfam Dimerisation domain 29 74 IPR012967 GO:0046983
Bva06g00424 172 SUPERFAMILY "Winged helix" DNA-binding domain 11 75 IPR036390 -
Bva06g00424 172 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 43 167 IPR029063 -
Bva06g00424 172 Pfam O-methyltransferase domain 43 167 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00424 Bva-Chr6 5181835 5183897 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00424 9 75 Monolignol Biosynthesis Gene Families AT5G54160 44.776 6.18e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00424 K13066 - mtr:MTR_8g068760 121.709