Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00423 ATGCATTCTCCAAAACTGAATGatgtgcaagaagaagaaagctattCCTATGCTATGCAGCTAGCTAGGTCAATAGCGCTTCCCATGGTCTTGCATTCTGCTATTGAGCTAAAGCTGTTTGATATAATTGCTAAGTCGGGTCCAGACGCCAAGCTCTCTGCAGTGGACATTGCTGCCCAGATTACCAGCAAGAACCCAGAAGCAGCTTCTATGTTAGACCGTATGCTGAGGCTCCTAGCCACTCACTCTGTGCTTCATTGCTCTCTTGTTGAAGATCAACAAAACGTTGGTTCTTTTCAGAGGCTTTATAGCCTAAACTCTGTCTCTAAATATTTTGTGCCTGACCATGATGGGATGTCATTGGGGAACTACATGGTCTTCCATCATGACAAGGTCGCCTTAGAGAGTTGGTCCAAATTGACAGAGGCAGTTGTAGAAGGGGGTATTCCATTCTTTAGAGCTCATGGCTGCCATGTCTTTGAGTACCCAAGCTTCGATGCCAGGCTTAATAAGGTTGTTAACGCTGCGATGATTAGTGTTAGCAACGTGGTTATGAAGAAGATTGTTGAAATCTATAAAGGTTTCGAGGGTATCAATACACTGGTGGATGTTGGAGGGGGTCTTGGGCTTACCCTTAACTTGATCGTTTCCAAACACCAACATATCCATGGTATCAATTTCGATTTGCCCCATGTGATTCAACGAGCCCCTCCCTATCCTGGTGTGGAACATGTGGAAGGAGACATGTTTGAAAGTGTGCCCAAAGGAGATGCTATATTTATGAAGTGGACACTTCATGATTGGAGTGATGAAATGTGTCTGAAAGCGTTGAAGAATTGCTATGATGCTATTCCTCAAGATGGAAAAGTAATTGTTGTGGAGGGAATTCTTCCTGTGTTACCTGAGACAAGTGCTGCTACAAAGAGCAACTCCCAGCTTGATGTTCAAGTAATGGTAAACGTAGGTGGGAAAGAGAGAACTGAACAAGAATTCACGGAATTGGGAATAGCAGCTGGATTTCGTGCAGTTAAATTTGACTATTATGTTTGTAACCAATGGATAATAGAGTTCactaaata 1079 0.4217 MHSPKLNDVQEEESYSYAMQLARSIALPMVLHSAIELKLFDIIAKSGPDAKLSAVDIAAQITSKNPEAASMLDRMLRLLATHSVLHCSLVEDQQNVGSFQRLYSLNSVSKYFVPDHDGMSLGNYMVFHHDKVALESWSKLTEAVVEGGIPFFRAHGCHVFEYPSFDARLNKVVNAAMISVSNVVMKKIVEIYKGFEGINTLVDVGGGLGLTLNLIVSKHQHIHGINFDLPHVIQRAPPYPGVEHVEGDMFESVPKGDAIFMKWTLHDWSDEMCLKALKNCYDAIPQDGKVIVVEGILPVLPETSAATKSNSQLDVQVMVNVGGKERTEQEFTELGIAAGFRAVKFDYYVCNQWIIEFTK 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00423 359 Pfam Dimerisation domain 29 80 IPR012967 GO:0046983
Bva06g00423 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 359 IPR016461 GO:0008168
Bva06g00423 359 Pfam O-methyltransferase domain 137 341 IPR001077 GO:0008171
Bva06g00423 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 357 IPR029063 -
Bva06g00423 359 Gene3D Vaccinia Virus protein VP39 114 359 IPR029063 -
Bva06g00423 359 Gene3D - 2 112 IPR036388 -
Bva06g00423 359 PIRSF O-mtase 2 359 IPR016461 GO:0008168
Bva06g00423 359 PANTHER O-METHYLTRANSFERASE 10 359 IPR016461 GO:0008168
Bva06g00423 359 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 10 359 - -
Bva06g00423 359 SUPERFAMILY "Winged helix" DNA-binding domain 10 115 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00423 Bva-Chr6 5178022 5180246 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00423 9 359 Monolignol Biosynthesis Gene Families AT5G54160 51.268 1.43e-126 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00423 K13066 - qsu:112008542 436.802