Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00422 ATGTATTCTCCAAAACTTAATGatgtgcaagaagaagaaagctacTCCTACGCTATGCAGCTAGCTAGGTCAATAGCGCTTGCCATGGCCTTGCACACTGGTACTGAGCTAAAGGTGTTTTATATAATTGCTAAATCAGGACCAGATGCAAAGCTCTCTGCAGTGGACATTGCTGCCCAGATTGCCAGCAAGAACCCAGAAGCAGCTACTATGCTAGACCATGATGGGATGTCATTGGGAAACTACACAGCCTTGATTCAGACCAAGAGACAATTGGTTAGTTCTCTATTTTCATTCAGAATGTGCAAATTGAAAGATGCAGTTGTAGAAGGGGGTGTTCCATTCAACAGAGTTCATGGCTACCAAGCATTTGAGTACCCAGGCTTGGATGCCAggtttaataaagtttttaacaCCGCGATGATCAGTCTCATAACCATGGCTATGAAAAAGATTGTTGATGTTGAAATCTATAATGGTTTCGAGGGTATCAATACACTGGTGGATGTTAGTGGGGGTTTTGAGTTTACTCGTAATCGTTTTTA 545 0.3945 MYSPKLNDVQEEESYSYAMQLARSIALAMALHTGTELKVFYIIAKSGPDAKLSAVDIAAQIASKNPEAATMLDHDGMSLGNYTALIQTKRQLVSSLFSFRMCKLKDAVVEGGVPFNRVHGYQAFEYPGLDARFNKVFNTAMISLITMAMKKIVDVEIYNGFEGINTLVDVSGGFEFTRNRF 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00422 181 Gene3D - 3 88 IPR036388 -
Bva06g00422 181 PANTHER O-METHYLTRANSFERASE 73 174 IPR016461 GO:0008168
Bva06g00422 181 SUPERFAMILY "Winged helix" DNA-binding domain 10 73 IPR036390 -
Bva06g00422 181 Gene3D Vaccinia Virus protein VP39 89 174 IPR029063 -
Bva06g00422 181 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 10 78 - -
Bva06g00422 181 Pfam O-methyltransferase domain 103 173 IPR001077 GO:0008171
Bva06g00422 181 PANTHER O-METHYLTRANSFERASE 10 78 IPR016461 GO:0008168
Bva06g00422 181 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 73 174 - -
Bva06g00422 181 Pfam Dimerisation domain 29 73 IPR012967 GO:0046983
Bva06g00422 181 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 96 173 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00422 Bva-Chr6 5175399 5176153 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00422 9 177 Monolignol Biosynthesis Gene Families AT5G54160 38.424 1.48e-36 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00422 K13066 - zju:107418658 164.081