Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00419 atgtataataataataattcactaAAAATGCATCCAAAACATAGTGAtgtggaagaagaagaaagctattTCTATGCTATGCAACTAGCTAGCTCAATAGCGCTTCCCATGGTCTTGAAAACTGCTATTGAGCTAAAGGTGTTTGATATAATTGCTAAGTCAGGTCCAGATGCCAAGCTCTCTGCAGTCGACATTGCTGCCCAGATTACTAGCAAGAACCCAGAAGCAGCTGCAGTTCTGTTAGACTGCATGCTTAGGCTCCTAGCCACTCACTCTATACTTCATTGCTCTCTTATTGGAGATCAACAAAAGTTTGGTTTCTTTCAGAGGCATTACAGCCTAAACTCAGTGTCTAAATATTTTGTGGATGATGATCATGGGATATCAGTGGGGAACTACACAGCCTTGGTTCATGACAAGGTCTTCTTAGACAGCTGGTCCCGATTGAAAGAGGCAGTTGTAGAAGGGGGTATTCCATTCAATAGAGCTCATGGCTGCCATGCCTTTGAGTACCCAGGATCGGATGCAAGGTTTAATGAAGTTTTCAATACTGCAATGTTCAATCATACCACTATTGATATGAAGAAGATTCTTGAAATCTATAATGGGTTTGAGAATATCAGTGCACTAGTGGATGTTGGTGGGGGTCTTGGAATCACCCTTCACTTGATCATTTCCGAACATCAACACATTCATGGTATCAATTTCGATTTGGCTCATGTTATTCAACATGCACCTCCCTATCTGGGTTTGGAGCACGTGGGAGGAGACATGTTTGAAAGTGTGCCTAAAGGAGATGCTATATTTTTGAAGTGGATACTCCATGATTGGAGTGATGAAAGTTGCTTGAAAGTATTAAAGAATTGCTACGATGCTCTTCCTCAAGATGGTAAGGTGATTGTTGTAGAGGCAGTGGTTCCCGTTTCACCTGAGATTAGTGCTACTGCAAAGAATATCTCTCAGCTTGATGTGCAAATGATGACTGTAAACCCAGGTGGAAAAGAGAGaactaaacaata 1019 0.3974 MYNNNNSLKMHPKHSDVEEEESYFYAMQLASSIALPMVLKTAIELKVFDIIAKSGPDAKLSAVDIAAQITSKNPEAAAVLLDCMLRLLATHSILHCSLIGDQQKFGFFQRHYSLNSVSKYFVDDDHGISVGNYTALVHDKVFLDSWSRLKEAVVEGGIPFNRAHGCHAFEYPGSDARFNEVFNTAMFNHTTIDMKKILEIYNGFENISALVDVGGGLGITLHLIISEHQHIHGINFDLAHVIQHAPPYLGLEHVGGDMFESVPKGDAIFLKWILHDWSDESCLKVLKNCYDALPQDGKVIVVEAVVPVSPEISATAKNISQLDVQMMTVNPGGKERTKQ 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00419 339 Gene3D Vaccinia Virus protein VP39 122 339 IPR029063 -
Bva06g00419 339 SUPERFAMILY "Winged helix" DNA-binding domain 18 124 IPR036390 -
Bva06g00419 339 Pfam O-methyltransferase domain 146 338 IPR001077 GO:0008171
Bva06g00419 339 Gene3D - 5 121 IPR036388 -
Bva06g00419 339 PIRSF O-mtase 4 339 IPR016461 GO:0008168
Bva06g00419 339 PANTHER O-METHYLTRANSFERASE 6 338 IPR016461 GO:0008168
Bva06g00419 339 Pfam Dimerisation domain 37 89 IPR012967 GO:0046983
Bva06g00419 339 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 6 338 - -
Bva06g00419 339 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 27 339 IPR016461 GO:0008168
Bva06g00419 339 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 338 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00419 Bva-Chr6 5162837 5164810 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00419 17 339 Monolignol Biosynthesis Gene Families AT5G54160 52.761 1.25e-125 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00419 K13066 - qsu:112008542 416.772