Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00417 ATGCatccaaaatttaatgatgtggatgaagaagaagaagaagaaagcttttCCTATGCTATGCAGCTGGCCAGGTCAATAGCGCTTCCCCTGGTCTTGAAAACGGCTATTGACCTAAAGGTGTTTGATATAATTGCTAAGTCAGGTCCAGATGCCAAGCTCTCTGCAGTGGACATTGCTGCCCAGATTACTAGCAAGAACCCAGAAGCAGCTGCAATTCTGTTAGACCGTATGCTTGGGCTCCTAGCCACTCACTCTATACTTCATTGCTCTCTTGTTGGAGATCAACAAAAGTTTGGTTTCTTTCAGAGGCATTACAGCCTAAAGTCTCTGTCTAAATATTTTGTGGATGATGATCATGGGATATCACTGGGGAACTACGCAGCCTTGGTTCATGACAAGGTCTTCTTAGACAGCTGGTCCCGATTGAAAGAGGCAGTTGTAGAAGGGGGTATTCCATTCAATAGAGCTCATGGCTGCCATGCCTTTGAGTACCCAAGCTTGGATGCAAGGTTTAATGAAGTTTTCAATACTGCAATGTTCAATCATACCACTATTGTTATGAAGAAGATCCTTGAAATCTATAATGGTTTTGAGAATATCAGTACACTGGTGGATGTTGGTGGGGGTCTTGGAATCACCCTTCATTTGATTATTTCCAAACATCAACATATTCATGGTATCAACTTCGATTTGGCTCATGTTATTCAACATTCTCCTCCCTATCTAGGTTTGGAGCATGTGGGAGGAGACATGTTTGAAAGTGTGCCTAAAGGAGATGCTATATTTTTGAAGGTCGGTGTTCTTAAGCTTTTTATATa 821 0.3995 MHPKFNDVDEEEEEESFSYAMQLARSIALPLVLKTAIDLKVFDIIAKSGPDAKLSAVDIAAQITSKNPEAAAILLDRMLGLLATHSILHCSLVGDQQKFGFFQRHYSLKSLSKYFVDDDHGISLGNYAALVHDKVFLDSWSRLKEAVVEGGIPFNRAHGCHAFEYPSLDARFNEVFNTAMFNHTTIVMKKILEIYNGFENISTLVDVGGGLGITLHLIISKHQHIHGINFDLAHVIQHSPPYLGLEHVGGDMFESVPKGDAIFLKVGVLKLFI 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00417 273 SUPERFAMILY "Winged helix" DNA-binding domain 11 118 IPR036390 -
Bva06g00417 273 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 9 265 - -
Bva06g00417 273 Pfam O-methyltransferase domain 140 265 IPR001077 GO:0008171
Bva06g00417 273 Pfam Dimerisation domain 32 83 IPR012967 GO:0046983
Bva06g00417 273 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 265 IPR029063 -
Bva06g00417 273 Gene3D - 3 115 IPR036388 -
Bva06g00417 273 PANTHER O-METHYLTRANSFERASE 9 265 IPR016461 GO:0008168
Bva06g00417 273 Gene3D Vaccinia Virus protein VP39 116 268 IPR029063 -
Bva06g00417 273 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 273 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00417 Bva-Chr6 5156136 5157165 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00417 13 265 Monolignol Biosynthesis Gene Families AT5G54160 50.000 9.39e-88 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00417 K13066 - qsu:112008542 328.561