Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00409 ATGGTCATCGCAAAGTTTGGGAGCCAGAACGACAAGGAGAAGCATGAAACGCAAGTTGGGAAATACACGCTGGGTCGGATTCTCGGAGAAGGCAATTTCGGAAAAGTCAAATACGCTCGGAGCACCGATTCCGGTCAATCAGTTGCGATTAAGATTCTCGACAAGAGCAAGATCATCGACCTTAATGTCGCCGATCAGATAAAGAGGGAAATAGCTACCTTGAAGCTTCTCAAACATCCTAACGTTGTCAGATTATACGAGGTGTTGGCTAGCAAAACCAAGATTTATATGGTCCTGGAGTACGTGAACGGAGGAGAATTGTTTGACAAAATCGCATCCCATGGAAAAGTTCCAGAAGCCGAAGGTAGAAAGATGTTCCAACAGTTGATTGATGGTGTGAGCTACTGTCACAATAAAGGTGTCTTCCACAGGGATCTTAAGCTTGAGAATGTACTTGTGGATAGCCAAGGGAACATTAAGATATCTGATTTTGGTCTCAGTGCTCTACCCCAGCATTTAAGGAAAGATGGGCTGCTGCATACAACCTGTGGAAGTCCCAACTATGTTGCACCTGAGATTCTTGCCAATAGAGGTTATGACGGTGCAACAGCAGATACATGGTCATGTGGTGTTATCTTGTATGTGATTCTAACAGGATATCTCCCATTTGATGACAGAAATCTTGCCGTTCTTTACCAAAAgATTTTTAAAGGAGATGTTCAGATACCAAAATGGCTCTCGCCTGGTGCCCAAAACATGATAAGAAGGATTCTTGATCCCAATCCTGTTAGCCGGATAACAATTGCTGACATCAAACAAGATGAATGGTTCAGGCAAGACTATGTTCccgcgaagccagaggaagaggaagatgtATATACGGACGAGGAAGCCTCGTCTTCCGACCATGAAACAGCaagtgaagaagaagcaaatatTCCAGGATCACCAACACTCATCAATGCATTTCAGCTGATAGGGATGTCTTCGTGCTTAGACCTCTCTGGCTTCTTTGAAAAAGAGGATGTGTCTGAGAGGAAGATAAGATTTACATCCAACCATTCGGCGAAACACCTAATCGAAAGGATTGAGGACATTGTAACGGAAATGGGATATGGAGTccagaagaaaaatggaaaaTTGAAAGTGGTACAAGAAAACAAGACGCAGAAAAGTCTCGGTGGCCTCTCAGTGGAAGTAGAGGTCTTTGAAATAAGCCCATCTTTGTATGTCGTAGAGTTAAGAAAATCTTACGGAGATCCTTCTGTATATAGACAGTTGTGCAAGGAGTTATCAAATGATTTGGGTGTGCCCTCAGCCTCAAGCCCAAAACTAGGGAGCGAAGAGCATATAAGCATTTA 1361 0.4122 MVIAKFGSQNDKEKHETQVGKYTLGRILGEGNFGKVKYARSTDSGQSVAIKILDKSKIIDLNVADQIKREIATLKLLKHPNVVRLYEVLASKTKIYMVLEYVNGGELFDKIASHGKVPEAEGRKMFQQLIDGVSYCHNKGVFHRDLKLENVLVDSQGNIKISDFGLSALPQHLRKDGLLHTTCGSPNYVAPEILANRGYDGATADTWSCGVILYVILTGYLPFDDRNLAVLYQKIFKGDVQIPKWLSPGAQNMIRRILDPNPVSRITIADIKQDEWFRQDYVPAKPEEEEDVYTDEEASSSDHETASEEEANIPGSPTLINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNHSAKHLIERIEDIVTEMGYGVQKKNGKLKVVQENKTQKSLGGLSVEVEVFEISPSLYVVELRKSYGDPSVYRQLCKELSNDLGVPSASSPKLGSEEHISI 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00409 453 Gene3D Transferase(Phosphotransferase) domain 1 12 318 - -
Bva06g00409 453 PANTHER - 11 442 - -
Bva06g00409 453 ProSiteProfiles NAF domain profile. 315 339 IPR018451 GO:0007165
Bva06g00409 453 MobiDBLite consensus disorder prediction 286 315 - -
Bva06g00409 453 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00409 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Bva06g00409 453 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00409 453 CDD CIPK_C 321 432 - -
Bva06g00409 453 Gene3D Kinase associated domain 1, KA1 319 437 - -
Bva06g00409 453 Pfam Protein kinase domain 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00409 453 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Bva06g00409 453 PANTHER CBL-INTERACTING PROTEIN KINASE 21 11 442 - -
Bva06g00409 453 SUPERFAMILY Protein kinase-like (PK-like) 19 307 IPR011009 -
Bva06g00409 453 Pfam NAF domain 317 376 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00409 Bva-Chr6 5118681 5122870 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00409 85 439 CBL-interacting serine-threonine protein kinases AT3G17510 68.451 3.04e-180 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bva06g00409 Pkinase 1.7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00409 K07198 - cit:102613698 678.322