Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00407 atgaaaaatgccaAAGTGATTGCAGGAGGAATCTCCATTATCCTTGTGTTAGGTGTAGTCATTGGTGTCATAGCTGGGGTCGCCCGCAGTGGATCCAGTAACATTGAAGAGCATGTTTCCACAACCTCAAAATATATTGCTTCTATATGCAACACGACAGATTACAAACAACAATGTGTTGAAAGTATAGGCAGTGTGGCCAGCAACAACTCTGCCACACCAAAGGATTATATCCAAGCTGCTATTGGCTACACCATTTCACAGGTTCAAGCAGCAATGAACAAACCAGAAGGCCTAGGCAAGGAAGCCAACAGCTCAGTAGATAAAATGGGTTTGGAGGATTGCAAGGAATTGTTGGATTTTGCCATTGATGAATTGCAAGCAGCGTTTTCAATGGTGAGAGATAATCAACTGCATACCTTGGCTGATAGAGAAGCAGAGCTCAGAGATTGGATGAGTGCTGTGATATCATACCAACAGACATGCCTTGATGGGGTGAGTCAATCTGATATAAAACAAGAATTGAACAATGGGCTTCTCAAAGCCACCGAGCTAACAAGCAATGCCTTGGCCATTGTTTCTGCCATCTCTGATATCATGAGCTCTTTTAATATCACAAAAAACACCACCACCGGCAGCGCCACCTCGCGAAAGCTGCTGGAAGCTGTGGGGAGCAAAGGGGAATTCCCTTCATGGGTATCAGCTGCTGATAGGAAGCTATTGGGCAGCCATAGTAGACTGCCGCCTAATGCAGTGGTGGCGAAAGATGGGAGTGGACAATACAAAACCATTGCTGCCGCTCTTGCTGCATACCCCAAGAATCTCTCGGGGagatttgttatttatgtGAAGGCTGGTGTTTATGATGAATATGTTACTGTcacaaagaatcaaattaatgtGTATATGTATGGAGACGGGCCTCGGAAGACCATCATCACTGGAAGCAAAAGCTATGCAAGCGGTGTCTCCACTTTTAAGACAGCTTCCTTTGCGGTTGttggaaataatttcataGCCAAGGGCATGGGATTCAGGAACACAGCAGGGGCTGCAGGACACCAAGCCGTGGCGCTTCGAGTTCAATCGGATCAATCATCCTTCTATAACTGCAGAATGGAGGGTTACCAAGACACATTATACGTCCACGCACATCGCCAATTCTACCGCAACTGTATCATCACAGGCACGATAGACTTCATCTTTGGTGATGCCACAGCAGTGATCCAAAACTCCCAAATAGTTGTCAGGAAACCAATGGAGAACCAGCAAAACTTAGTGACAGCTCAAGGCAGAGTAGACAGACGTGAGTCTACTGGCATTGTTATCCAAAATTGCAGGATTGTCCCTGATAAACAACTCTACCCTACAAGGTTCAAGACAAGATCTTACCTGGGTAGACCATGGAAAGCTTATTCAAGGACTATCATTATGGAAACTATTATTGGGGACTTTATTCAAGCAGATGGCTGGATGCCATGGAGTGGTACTCTTTATCTTGACACATTAGATTATAGAGAATATGGCAATCGCGGCCCTGGTGCTGCAACTGATAGAAGGGTCAAATGGAAGGGTTACAAGGTGATAACAGATAGAAATGAGGCAGCACAATTCACCCCTGGGATTTTTCTGCAGGGAAATGACTGGATACTTTCAACTGGTATACCAAATTATCTTGGCTTCACTAATGCTAGGGATATGTTGTG 1706 0.4373 MKNAKVIAGGISIILVLGVVIGVIAGVARSGSSNIEEHVSTTSKYIASICNTTDYKQQCVESIGSVASNNSATPKDYIQAAIGYTISQVQAAMNKPEGLGKEANSSVDKMGLEDCKELLDFAIDELQAAFSMVRDNQLHTLADREAELRDWMSAVISYQQTCLDGVSQSDIKQELNNGLLKATELTSNALAIVSAISDIMSSFNITKNTTTGSATSRKLLEAVGSKGEFPSWVSAADRKLLGSHSRLPPNAVVAKDGSGQYKTIAAALAAYPKNLSGRFVIYVKAGVYDEYVTVTKNQINVYMYGDGPRKTIITGSKSYASGVSTFKTASFAVVGNNFIAKGMGFRNTAGAAGHQAVALRVQSDQSSFYNCRMEGYQDTLYVHAHRQFYRNCIITGTIDFIFGDATAVIQNSQIVVRKPMENQQNLVTAQGRVDRRESTGIVIQNCRIVPDKQLYPTRFKTRSYLGRPWKAYSRTIIMETIIGDFIQADGWMPWSGTLYLDTLDYREYGNRGPGAATDRRVKWKGYKVITDRNEAAQFTPGIFLQGNDWILSTGIPNYLGFTNARDML 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00407 568 Pfam Pectinesterase 250 547 IPR000070 GO:0030599|GO:0042545
Bva06g00407 568 Pfam Plant invertase/pectin methylesterase inhibitor 45 192 IPR006501 GO:0004857
Bva06g00407 568 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 45-RELATED 29 560 - -
Bva06g00407 568 SUPERFAMILY Pectin lyase-like 247 557 IPR011050 -
Bva06g00407 568 Gene3D - 244 561 IPR012334 -
Bva06g00407 568 CDD PMEI-like_3 48 197 - -
Bva06g00407 568 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 197 IPR035513 -
Bva06g00407 568 PANTHER PECTINESTERASE 29 560 - -
Bva06g00407 568 ProSitePatterns Pectinesterase signature 2. 394 403 IPR033131 -
Bva06g00407 568 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 198 IPR035513 -
Bva06g00407 568 SMART PMEI_2 41 192 IPR006501 GO:0004857
Bva06g00407 568 TIGRFAM PME_inhib: pectinesterase inhibitor domain 33 194 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00407 Bva-Chr6 5112070 5114140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00407 11 561 Carbohydrate Esterase AT3G05610 44.365 4.84e-169 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00407 K01051 - qsu:111997763 717.998