Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00400 ATGGCATCTGGTCTGAATTCAGGACTGTCCAAGGAAACATCCGTTTTCGGTTTGAAAGTGTGGGAACTAATGGGAATAACGGTCGGGTTGTTCATTGTAATAATTCTTGTGGTACTGTCAATATGTCTTACATCACGAAAGAAATCCAGAAAATTCAACAGCATGCTTCCCCTTGGCCATATGTTATCGGTTTCAGAAGAGATCAAAGAGATTAGAGTTGATCAAGCTTCAGCAAATAACCATCCACAGAATGGTGCTTTCATGAGCCTGTATGACAAACTTAATGAAAAAGAGTCAGAAAAGGTTTtgatccaaacaaaaaatggggATAATACCAGTCAATCAGGCTCATTTACTCATGTAGAGAAAGATGCTGCCGGCTCTCAATCAGGTGAAGACAGTGGTGCAGGGACTGTCTCTTCTTACAGGCCTTCTTTTCATACTATGGCATCCCCGTTGTCTGGCCTACCTGAGTTTTCTCACCTTGGCTGGGGACACTGGTTTACATTAAGGGACCTTGAACTTGCAACAAACAggttttcaaaagaaaacgTTATTGGTGAAGGTGGATATGGAGTTGTTTATCGAGGTGAGCTAATTAACGGGAGTCCTGTTGCTATCAAGAAGCTCCTCAATAATTTGGGACAAGCTGAAAAGGAATTCAGGGTGGAAGTTGAAGCTATTGGTCATGTGCGGCATAAGAACTTGGTTCGACTTCTGGGTTTCTGCATTGAAGGCACTCACAGGTTATTGGTTTATGAATACGTTAACAATGGTAATCTGGAGCAGTGGCTTCATGGAGCCATGCGTCAGTATGGGTATCTTACTTGGGATGCTCGCATGAAAGTTCTACTTGGCACAGCAAAAGGACTGGCTTATTTGCATGAGGCAATTGAGCCAAAAGTTGTGCATCGAGATATTAAGTCAAGCAATATTCTAATTGATGACGACTTTAATGCAAAGATATCTGACTTTGGGCTGGCTAAGTTGCTGGGTTCTGGAAAAAGCCATATCACAACTAGAGTAATGGGTACTTTTGGATATGTGGCACCAGAATATGCCAATTCAGGTTTACTGAATGAGAAGAGCGATGTTTATAGCTTTGGGGTATTAGTCCTTGAAGCAATTACCGGAAGAGACCCAGTGGATTATGGGCGACCAGCAGCTGAGGTGAATTTGGTTGACTGGCTCAAGATGATGGTGGGGAGTAGGCGTTCAGAAGAGGTGGTGGATCCAAACATTGAGACTAGGCCATCAACGAGTGCCCTTAAACGAGCCCTTTTGACTGCTTTGAGGTGTGTTGATCCATATGCTGAGAAAAGACCAAAGATGAGCCAAGTCGTCCGCATGCTTGAATCAGAGGAATATCCCATTCCGCGAgagGATCGAAGGCGGCGAAGGAGTCACGCAAGCAACACAGAGGGAGTGGCCCTGAGGGAGACTTCTGATACAGAAAAGAGTGACAATCCAGATTACAGGTCCAATGGTAGAAGGAAATA 1499 0.429 MASGLNSGLSKETSVFGLKVWELMGITVGLFIVIILVVLSICLTSRKKSRKFNSMLPLGHMLSVSEEIKEIRVDQASANNHPQNGAFMSLYDKLNEKESEKVLIQTKNGDNTSQSGSFTHVEKDAAGSQSGEDSGAGTVSSYRPSFHTMASPLSGLPEFSHLGWGHWFTLRDLELATNRFSKENVIGEGGYGVVYRGELINGSPVAIKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGFCIEGTHRLLVYEYVNNGNLEQWLHGAMRQYGYLTWDARMKVLLGTAKGLAYLHEAIEPKVVHRDIKSSNILIDDDFNAKISDFGLAKLLGSGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLVLEAITGRDPVDYGRPAAEVNLVDWLKMMVGSRRSEEVVDPNIETRPSTSALKRALLTALRCVDPYAEKRPKMSQVVRMLESEEYPIPREDRRRRRSHASNTEGVALRETSDTEKSDNPDYRSNGRRK 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00400 499 Gene3D Phosphorylase Kinase; domain 1 161 255 - -
Bva06g00400 499 MobiDBLite consensus disorder prediction 106 140 - -
Bva06g00400 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 302 314 IPR008271 GO:0004672|GO:0006468
Bva06g00400 499 ProSitePatterns Protein kinases ATP-binding region signature. 186 209 IPR017441 GO:0005524
Bva06g00400 499 SMART serkin_6 180 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00400 499 SUPERFAMILY Protein kinase-like (PK-like) 164 461 IPR011009 -
Bva06g00400 499 CDD STKc_IRAK 186 452 - -
Bva06g00400 499 Pfam Protein kinase domain 181 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00400 499 MobiDBLite consensus disorder prediction 454 499 - -
Bva06g00400 499 Gene3D Transferase(Phosphotransferase) domain 1 256 467 - -
Bva06g00400 499 ProSiteProfiles Protein kinase domain profile. 180 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00400 499 PANTHER RECEPTOR-LIKE KINASE PLANT 2 498 - -
Bva06g00400 499 MobiDBLite consensus disorder prediction 106 124 - -
Bva06g00400 499 PANTHER OS01G0323000 PROTEIN 2 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00400 Bva-Chr6 5078969 5082682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00400 157 454 Trihelix Transcription Factor Family AT1G70460 49.835 8.39e-94 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Bva06g00400 Pkinase 4.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00400 - - gmx:100793499 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01211 05 6296883 6300878 Bva06g00400 06 5078969 5082682 BWGD