Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00399 ATGGGCTGCTTTGGATTTTGCAAAGAAAGTGATGTTTATACACCTGCTGACAGGGGACCGTCCACGCCAGTCCATCCTTCGGGGAGCACTGGTTATAATGGAAGACAACCTGCACAAGCCCCTTTACGTACTGTTAATTTTCAACCCATTGCTGTACCATCGATCTCAGTAGATGAACTAAAGGCTCTGACAGATAATTTTGGGCCAAAATCTTTCATTGGTGAGGGTGCTTACGGCAAAGTATATTATGGGGAATTGAAAGATGGACGTGCTGTTGTAATTAAGAAGTTAGATTCCAGTACGCAACAACCTGATCAGGAATTTCTTGCCCAGGTCTCCATTGTATCAAGGCTAAAGCATGAAAATGTCGTAGAGCTTGTTGGTTATTGTGTTGATGGCCCTCTTCGTGCCCTTGCCTATGAGTATGCTCCTAAGGGATCTCTTCATGATATTCTACACGGACGTAAAGGTGTGAAAGGAGCGAATCCTGGTCCAGTATTGTCATGGGCAGAGAGAGCTAAAATTGCTGTTGGGGCAGCTAGAGGACTTGAATATCTGCACGAGAAAGCAGAACCTCGGATTATCCATCGTTTCATCAAATCTAGCAACATTCTACTCTTTGAAAATGATGTTGCAAAGATTGCTGATTTTGATTTGTCAAATCAAGCCCCTGATGCAGCAGCACGTCTGCATTCTACTCGTGTTCTTGGAACTTTTGGCTATCATGCACCAGAATATGCAATGACTGGACAGTTCACGGCAAAAAGTGATGTTTACAGTTTTGGAGTTATACTGCTAGAACTCTTAACTGGGCGCAAGCCCGTCGATCATACACTGCCGCGAGGGCAGCAGAGCCTTGTCACCTGgGCAACACCAAGACTCAGCGAAGATAAAGTGAAGCAGTGTGTGGATGCTAGATTAAAGGGAGAGTACCCTCCAAAGGCAGTAGCAAAGCTGGCTGCTGTTACTGCACTGTGTGTGCAGTATGAAGCTGAGTTTCGGCCTAATATGAGCATTGTAGTGAAAGCTCTACAGCCTCTGCTCAATCCTCGTTCTCTTCACACAAAGGAAGCACCCAATCTGTA 1085 0.4525 MGCFGFCKESDVYTPADRGPSTPVHPSGSTGYNGRQPAQAPLRTVNFQPIAVPSISVDELKALTDNFGPKSFIGEGAYGKVYYGELKDGRAVVIKKLDSSTQQPDQEFLAQVSIVSRLKHENVVELVGYCVDGPLRALAYEYAPKGSLHDILHGRKGVKGANPGPVLSWAERAKIAVGAARGLEYLHEKAEPRIIHRFIKSSNILLFENDVAKIADFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQFTAKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPRLSEDKVKQCVDARLKGEYPPKAVAKLAAVTALCVQYEAEFRPNMSIVVKALQPLLNPRSLHTKEAPNL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00399 361 Pfam Protein tyrosine and serine/threonine kinase 72 344 IPR001245 GO:0004672|GO:0006468
Bva06g00399 361 Gene3D Transferase(Phosphotransferase) domain 1 144 358 - -
Bva06g00399 361 ProSiteProfiles Protein kinase domain profile. 67 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00399 361 MobiDBLite consensus disorder prediction 23 37 - -
Bva06g00399 361 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Bva06g00399 361 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 355 - -
Bva06g00399 361 CDD STKc_IRAK 73 347 - -
Bva06g00399 361 Gene3D Phosphorylase Kinase; domain 1 32 142 - -
Bva06g00399 361 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 355 - -
Bva06g00399 361 SUPERFAMILY Protein kinase-like (PK-like) 45 344 IPR011009 -
Bva06g00399 361 MobiDBLite consensus disorder prediction 15 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00399 Bva-Chr6 5076295 5078782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00399 48 345 Receptor kinase-like Gene Family AT4G02010 50.831 4.08e-92 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Bva06g00399 PK_Tyr_Ser-Thr 6.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00399 K13436 - gmx:547596 596.66