Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00396 ATGCACTCAAATGGCTCAGACAACACAAGGGACCAGGATATTCTGTCTCATCTGCTAAGGAACCTGGCCAGTCTAGCTGGTACAATTAATGGAAGAAACATAGCCTCCTTATTGGAGGGATCTCAAGGTTTGCTAAATGCTGGGACATCTGGTGCTGCACAAAATGTGCCCAATATGAATTCAAATGGCCCTGAACCCTCTAGGCCACCTGGTTCAACAATCAAGAGAAACGATGGTCTCACTCATCAGGACTCTCCAAAGTGTATGGGACAGCGTGCAGCAGTTTCTGCTTATGATAagacacaaaaatatttaacttcaaGCAATAGTGGGAAAGGAATTTTAAATTCTCCTTCTGGACAACAGCCTTCCAATGTGCATCTGCCTAGGGATGGCTTTCCTCCCCAACTAGTTGCAGCAGAGACTACAGTTGGAAGGAATGGATTAAACAACATTGACCTGAATAATGTTTGTGATGATATACAGGATGATGGAGAGAACCCAGGAAAGTCTCATCCTGGCATGACTTCAGGGATTGGGTCTCTTGGTCATCCTTCATGGTTACAATATGATTCTCACAAGTCCAGTCCACCACAGACAAGTAGAAACTCTGATTCAACATCTACCCAGTCACCATCTAGTTCTAGTGGAGAGGCTCAGAGTCGTACAGATAGGAttgtttttaaactttttgggAAGGATCCAAATGATTTTCCCCTTGTTCTCCGAACGCAGATCCTCAACTGGTTATCCCACAGTCCTACAGAGATTGAGAGCTATATTAGGCCGGGCTGTATCATATTAACAATATATCTCCGTCTAGAAAAATCAGCATGGGAGGAGCTCTGCTGTAACCTAGGGTCCAACTTGAAAAATCTTCTTGCTGCATCAAATGACACTTTCTGGAGAACAGGATGGATATACACAAGGGTGCGACACTCTGTAGCTTTTCTATACAATGGTCAGGTTGTCTTGGATGTGCCCTTGCACTTCAAAACCCCAAAAGAGTGTAGGATTTCATGCATTAAACCACTTGCTGTTTCTGCAAATGCAAGTGCTCAATTTATTGTGAAAGGGTTCAACCTTTCCCGGTCTAGCACAAGGTTGCTCTGTGCACTTGAAGGGAAGTATCTTGTACAGGGCAGTTGTTATGACTTGATTGATGGTGCTGATGCAGCTAGCGACAATGATGAGCTTCAGTGCCTCAACTTTTCATGTCATATACCAAAAGTGGTTGGGAGAGGATTCATTGAGGTGGAAGATCATGGTCTTAGCAGCTCTTCCTTTCCATTTATAGTTGCAGAGCAAGAACTTTGTTCAGAGATTTGTAAACTGGAGAGTGTGATTGAGGCGGCTGACTCTGTCGATGACGTTGAGATAAAAGGCaaacaaatggaagaaaagagTAAAGCCTTGGATTTCATACAAGAAATGGGTTGGATCCTTCATAGAAGTCAAATGAAAGTTCGATTAGGTCCCATGGCACCTGCCCAGGATCTTTTCCAAATCAATCGGTTCATACGGCTAGTTGACTTCTCCATGGACCATGATTGGTGTGCTGTAATGAAAAAACTCCTGGAAATTATGTTTGATTCTACTGTTGATGCAGGAGAGCATACCTCCAAAGAGCTTGCATTGTTAGACATGGGTCTACTGCACAGAGCTGTGAAGAGAAATTGCAGGCCTATGGTGGAACTACTGTTAAAATTTGAGCCGGTTAAAACTTCAGATGGCATAGATAGTGAGGAAAAACAAGTTGACAAGGCCTCTAATGGATTCCTGTTTAAACCTGACGCTGTTGGACCTGCTGGGTTGACTCCCCTTCATGTGGCAGCAAGTATGAAGGACTCAGAGACTGTCTTAGACGCCTTAACTGATGATCCGGGAATGGTGGGAATTGAAGCTTGGAAAAGCGCTCGTGATGATACTGGTTTGACACCCAATGACTACGCAAGCCTGCGGGGCCACTATTCCTACATCCACCTTgttcaaaggaaaataagcAGGAAAAGTGAAACTAAACATGTTATTCTTGATATCCCAGAAACCTTTGTAGAGAataagagcaagcacaagcatTCAGACGGCCATAGATCATCCAAAGTTTCAAGCTTGCAGACTGAGAAGATTCCATTGCCACGTAGCTGCGAGCTCTGCCAGCACAAGCTGGCTTATGGTGGGACGAGAACAGCTATGGTTTACAGGCCAACAATGCTCTCAATGGTGGCCATTGCAGCTGTGTGTGTTTGTGTGGCTTTGCTCTTTAAAAGCTCACCCAGAGTGTATTATGTATTCCAGCCCTTCAGATGGGAAAACTTGGAGTACGGTTCTAGCTA 2336 0.4277 MHSNGSDNTRDQDILSHLLRNLASLAGTINGRNIASLLEGSQGLLNAGTSGAAQNVPNMNSNGPEPSRPPGSTIKRNDGLTHQDSPKCMGQRAAVSAYDKTQKYLTSSNSGKGILNSPSGQQPSNVHLPRDGFPPQLVAAETTVGRNGLNNIDLNNVCDDIQDDGENPGKSHPGMTSGIGSLGHPSWLQYDSHKSSPPQTSRNSDSTSTQSPSSSSGEAQSRTDRIVFKLFGKDPNDFPLVLRTQILNWLSHSPTEIESYIRPGCIILTIYLRLEKSAWEELCCNLGSNLKNLLAASNDTFWRTGWIYTRVRHSVAFLYNGQVVLDVPLHFKTPKECRISCIKPLAVSANASAQFIVKGFNLSRSSTRLLCALEGKYLVQGSCYDLIDGADAASDNDELQCLNFSCHIPKVVGRGFIEVEDHGLSSSSFPFIVAEQELCSEICKLESVIEAADSVDDVEIKGKQMEEKSKALDFIQEMGWILHRSQMKVRLGPMAPAQDLFQINRFIRLVDFSMDHDWCAVMKKLLEIMFDSTVDAGEHTSKELALLDMGLLHRAVKRNCRPMVELLLKFEPVKTSDGIDSEEKQVDKASNGFLFKPDAVGPAGLTPLHVAASMKDSETVLDALTDDPGMVGIEAWKSARDDTGLTPNDYASLRGHYSYIHLVQRKISRKSETKHVILDIPETFVENKSKHKHSDGHRSSKVSSLQTEKIPLPRSCELCQHKLAYGGTRTAMVYRPTMLSMVAIAAVCVCVALLFKSSPRVYYVFQPFRWENLEYGSS 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00396 778 MobiDBLite consensus disorder prediction 48 79 - -
Bva06g00396 778 MobiDBLite consensus disorder prediction 109 134 - -
Bva06g00396 778 MobiDBLite consensus disorder prediction 159 221 - -
Bva06g00396 778 PANTHER TRANSCRIPTION FACTOR SBP FAMILY-RELATED 1 777 - -
Bva06g00396 778 Gene3D - 512 681 IPR036770 -
Bva06g00396 778 MobiDBLite consensus disorder prediction 109 126 - -
Bva06g00396 778 SUPERFAMILY Ankyrin repeat 548 662 IPR036770 -
Bva06g00396 778 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 1 777 IPR044817 GO:0003677
Bva06g00396 778 MobiDBLite consensus disorder prediction 188 221 - -
Bva06g00396 778 MobiDBLite consensus disorder prediction 48 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00396 Bva-Chr6 5063725 5068911 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00396 149 778 SBP-box Gene Family AT2G47070 53.543 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00396 - - gmx:100776125 1118.22