Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00383 ATGGAAATGGAGGAACAGAGTTACTGTTTCGAGTGCCTCAAACTTCGAATCAACTCCGATTTCTCAGACCAACTCGTTTTCAATTATGGCATATCGGCTTCTGGTTTTCCTTTTGGATCTTCTGCAGTCGTTCAGATTTCTAGTACAAATGGTGAGACATCAGCTGCTCGGTTCATTTTGGAGTACTTGCCCAGGCAGGAGCTGAATTGTTTCGCCAAATACATCGATGAATATATTCTGAAAAATGATGAAGGCAGTAAGAGTAATTTTCATGATAGCACTTCAGCTGGAGTTAGTCAATGTAGTAACGAGGTGAATGGTGGAATTCCAAGAGATGAAGTTTCTTCATCAGATTCTGCAAGCAGAAAAGattcttcaaaaaattcaatttgtaaTCATTCTGGAAGATTTTCTTGCTTTAGGACAATCACTTCACTGGCCCCGATTGCTCACGTGGGGCTTCCTTCTTATTCTATGTTTGAAGAGATTGCCAGTAACTTCTTGTCTGGGTCACTCGAGGATTATGTATTTGAATCACTTGGTCTGTTGATTGAAGGGAAAGCATCAGGACGGGACAGCATAAACTTACTTAATTTAGTTGGGTTGCCGTCATTTGAGGAAGATATTTTTCCAGGTTCCCTGAGGCATCCCAACATAGCTCCTGTTCTTGCAATGTTTAAAACATCTGATCATGTTAACATAGTGCTTCCAAAGACACCTTACACCTTGGAAACTATTCTTTATTATAACCCATATGCCTTGAAATCTGACTGGCATAGAAGATTTCTCATATATCAACTTCTCTCTGCCTTATCTTTCCTACATGGTTTAGGGGTTTCCCATGGCAATATATGCCCATCAAATATTATGTTGTCTGACTCACTATGGTCTTGGCTGCGATTGTGGAGTCAACCTGTATTAGAATCTAACATGATTGCACGAAAGTATGAAAGCAATAATTCTACCCATGCAAAAATTGGTTGCTGCAATGGAGATTGTCATTCTAATAGCCTTTACACTGATCTAAAGCTTTCTCCATCAATAGATTGGCATTCTAGCTTTAACCAGTGGTGGAGAGGAGAGCTAAGTAATTTTGAGTATTTGCTTGTGTTAAATAGATTAGCAGGGAGGAGGTGGGGGGACCACACATTTCATCCTGTAATGCCATGGGTGATAGATTTTAGCACAAAACCTGATGAGAGTTGTGATGCAGGGTGGCGAGACTTGAGCAAGAGCAAATGGCGCTTGGCAAAAGGTGATGAACAGTTGGACTTTACCTATTCAACATCTGAAATCCCTCATCATGTATCAGATGAATGTCTGTCTGAATTGGCTGTCTGCAGTTATAAAGCAAGAAGGCTACCTTTGAGTGTTCTACGTATGGCTGTTCGTTCAGTGTATGAACCTAATGAATATCCTTCTACCATGCAGAGGCTTTACCAATGGACCCCTGATGAGTGCATTCCagagttttattttgatcCTCAAATATTTAAGTCAATACATGCTGGTATGGCTGATCTGTCTGTGCCTTCATGGGCTGAGACTCCTGAGGATTTCATTAAATTGCATCGTGATGCATTAGAAAGTGATAGGGTTTCACGTCAACTCCATCATTGGATAGATATTACTTTTGGGCACAAAATGTCAGGTCCAGCAGCTATTGCTGCCAAGAATGTCATGCTCCCTCTATCAGAACCCATGATGCCAAGATCCACAGGACGCCGTCAGCTCTTTACACGGCCACACCCCATTCGTCATGGAACTTCCAGAATAGCTTGCCAAAGTTCAAACAAATTTACTCACGTTCCAAGCCAGGTGAATGGAATCCAGGGTGAGACAATTCTTTCTGATGCTGCTTATCTACAAGAGTTAGAGAAAGCGTCTGCATTTTCTGAACATGCTAGGCATTTGAATGCACATTACCAGTATTCATTGAATCAACCAGCGAAGGAAATATCATCATTACAAGAGCCACCAAGCGAGACATTAAGAAAAAGTATATGCAAACCATCTTTGGTTGACACAAACTACCGGGCTCGATCTAAAATagatctaatttattttcttcagcaTATAAAGGAGGATGATGAAGGTTCCTTAGGATTTCCAGATTTTCTGCTCTGGAGGCAGAAATTATCTTGTTCAAAACTTGTCTCTGAAGATGTTTCGAGGGACATATTTTCCGTTGGTTGTCTCTTAGCAGAATTGCACCTGTGCAGGCCAATCTTTGATTCCACCTCATTGGCAGTATACTTGGAGGATGGTACCTTACCAGGATCTCTACAGGAACTACCTGATCATACCAGATTAATTGTTGAAGCATGTATCCAGAAGGATTGGATAAGGCGGCCATCGGCCAAAACTCTACTGGAGTCACCGTATTTTCCAAAAACAGTCCAGTCCACCTACTTGTTTCTTGCCCCACTTCAGCTTCTAGCTAAAGATGAAACACGTCTTCGTTATGCAGCAAATTTTGCAAAGCAAGGAGCTCTCAGGGAAATGGGCACAGTTGCAGCTGAAATGTGTGCTCCTTATTGCTTATCACTTGTTGGGAATTGTGTGACTGATACTGAAGCTGAATGGGCATATATACTACTGAAAGAATTCCTAAAATGCTTAACAGCAGAAGGAGTGAAAACACTGATCTTGCCAACGATTCAGAAGATTTTACAGACCACAGGTGATTCTCATTTGAAGGTTTCTCTTCTACAAGATTCATTTGTACGTGAAATATGGAATAGGGTTGGTAAACAAGcatatttggaaaatattcATCCATTGGTCTTGTCAAACTTGTATATTTCTCCTCATAAAAGTTCAGCTGCTTCTGCTTCAGTGCTTCTAATCAGCTCCAGTGAGGATCTTGGCATACCCATTACCATCCAtcagACAATCCTGCCTCTTGTTCACTGCTTTGGGAAGGGACTATGTGCTGATGGCATTGACGTGCTTGTGAGAATtgGTGGTGTTTATGGGGAATCCTTTATTGTCAAACAGATGCTGCCATTACTAAAAAATGTTGTTGGTTCCTTCATTGATTTGTCATGCATGAATAAGCCTGATCCTGTCCAGAGCTGGAGTGCTTTAGCACTCATTGATTGTTTGATGACGTTAGATGGGCTTGGAGCTTTCTTGCCTGAAGATGTTCTTATAAAAGAGCTGGTTGAAGACCAAGGTCGCCTACATGTTGGGGTTCTTTTGCAGAAGCATATGGAGATTGCTGTGTTACAGGTTGCTGCGACTACTCTCTTTGCACTTTGTCAGCGGATTGGACCAGATATGACAGTATTGCATGTTCTACCAAAACTGAAAGAACTATTTGATGAGCTTGCTTTCTCCAGGGAAATCGTTAAAGATTCTACTAATGTTGGCAGAAGCTTGAAGGTGTCCAAATCAAAAATTGGTGGAGAGTTACAAATTGAAAGTCGTATGGATCTAGTGTTCCTTCTCTATCCTTCTTTTGCATCCCTCCTTGGGATAGAGAAACTTCGCCAATGCTGTGCTACATGGTTGCTTCTTGAACAATTTCTTCTACGTCGTCATAATTGGAAGTGTGAATATGCAGGAGAATCACCTAAAAATGGCTCAGAAAATATCATTGCTAGAAGACCGTCAATTGGCAAAGGTGCTACATCTGAATACAATCCGGCAAAATTGTTGCTTAATGGGGTTGGATGGTCAATTCCACAATCCCAAGGAAGTAGAagttcaaaaaaattgatagcTCAGAGAGGATCATATAAAGTCCGTAAAAGTCAAAGTGTAATGCCTGAAGGAATGCCACACCAAATGAATCATGAACCTTGGTTTTGGTTCCCTAGTCCAGCCAAAATCTGGGATGCGCCTGAATTTTTGGGGCGTGTGGGGATTCAAAAAGATGACCTTCCATGGAAGATCAGAGCATCTGTCATATACTCTATCCGTGCACATCATGGAGCAGTACGGTCTTTAGCAGTTTGTCAAGATGAATGTACTGTGTTCACTGCAGGAATTGGCCATGGGTATAAAGGAAATGTTCAGAAATGGGAACTGAGCCAAACTAACAGTCTCTGCAGCTATCATGGTCATGAGGAGgTTGTAAATGATATTTGCATCCTGCCATCTAGTGGAAGAGTGGCATCTTGTGATGGAACAGTTCATATATGGAATAGTCAAACAGGGAAGCAAATATCAGTATTTGCTGAGTCCCAACCAGAATCTGCTTCTCTTACAAGCCAGCTATCCTCTCCATTGAAGATTAACAGTGACCAGGCTAATGTGCTTAATTTGAATACATTATCAAATGGAATATTGTCTAGCGCCTTTGATTCAAATCTTTATACTTGTATGCATATGTTAGAGTTTGCCAAAATTCTTGTGGTTGGCACTGGAAATGGTTCTCTTAGGTTCATTGATGTTGCTCAAGGTCAAAAGCTTCATATCTGGAGAGGGGAGCCTAATGAATCTAGTTTTTCTACGCTTATTTCTGCAATTTGTTCCTCTGGATCAGACAAGGTGCAAACTGGTGGAGTTTCCAATTTGCCATCCTTAATTTCAACTGGACTAAGTTCGGGTCATTGTAAACTATTTGATGCTAAAAGTGGAAATGTTGTTGCCTCTTGGCGAGCTCATGATGGATACGTAACAAAGTTGGCAGCACCAGAGGATCATCTGCTTATCTCGAGCTCCCTTGACAGAACTTTACGAGTCTGGGACTTAAGAATGAATTTGCCTTCACAGCCGATTATTTTCAGAGGTCATTCAGATGGCATATCCAGTTTCTCCATTTGGGGCCAAGATGTTATTTCCATTTCCAGAAATAGGATTGGACTTCTCTCCTTATCTAAATCTGCTGATGAAACAGACGGGCAGCATCACATTACTCCTCAGAAGCTTTACATATCAGACAATGGAACAAGAACAGTGGGCTTTACGACTCTCACCAATACTCTTTCATCACCGGACGGCGGCAGATTTTGTTTGACATCAACGGCGAGGAACATGGATGTGGAATCATCTAATATAAAGAAGTGGATTGTGTTGTACCCTGTCTACATAGATTCGAAGAAGACCATAGCTGAAGGAAGGCGAATTGGACTAAACAAAGCATGTGAAAATCCTAATTGCATCGAAATTCGTGACTGCTGCGACTATCTCAAACtaccaaataaaattgagCCAAACAAGGCTTATCCACGCGATTTTAGGCTAGAAGGGAGAGTGAGGGTACTGCTGAGAAAGGAAGACGGGACTCTATACAATCCTTCCATCTCATCAAGGAAACAGCTAATGCACACTGTTGCAGAAATGGTACCTAGACATCAAGGGAGGACCAAGAAGCAGGAGCCTGCATCAACGTCAGCTGCTGGACCTTCCAAAAAACCAGGGAAGggtggaaagaagagaagata 5393 0.4076 MEMEEQSYCFECLKLRINSDFSDQLVFNYGISASGFPFGSSAVVQISSTNGETSAARFILEYLPRQELNCFAKYIDEYILKNDEGSKSNFHDSTSAGVSQCSNEVNGGIPRDEVSSSDSASRKDSSKNSICNHSGRFSCFRTITSLAPIAHVGLPSYSMFEEIASNFLSGSLEDYVFESLGLLIEGKASGRDSINLLNLVGLPSFEEDIFPGSLRHPNIAPVLAMFKTSDHVNIVLPKTPYTLETILYYNPYALKSDWHRRFLIYQLLSALSFLHGLGVSHGNICPSNIMLSDSLWSWLRLWSQPVLESNMIARKYESNNSTHAKIGCCNGDCHSNSLYTDLKLSPSIDWHSSFNQWWRGELSNFEYLLVLNRLAGRRWGDHTFHPVMPWVIDFSTKPDESCDAGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRMAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYFDPQIFKSIHAGMADLSVPSWAETPEDFIKLHRDALESDRVSRQLHHWIDITFGHKMSGPAAIAAKNVMLPLSEPMMPRSTGRRQLFTRPHPIRHGTSRIACQSSNKFTHVPSQVNGIQGETILSDAAYLQELEKASAFSEHARHLNAHYQYSLNQPAKEISSLQEPPSETLRKSICKPSLVDTNYRARSKIDLIYFLQHIKEDDEGSLGFPDFLLWRQKLSCSKLVSEDVSRDIFSVGCLLAELHLCRPIFDSTSLAVYLEDGTLPGSLQELPDHTRLIVEACIQKDWIRRPSAKTLLESPYFPKTVQSTYLFLAPLQLLAKDETRLRYAANFAKQGALREMGTVAAEMCAPYCLSLVGNCVTDTEAEWAYILLKEFLKCLTAEGVKTLILPTIQKILQTTGDSHLKVSLLQDSFVREIWNRVGKQAYLENIHPLVLSNLYISPHKSSAASASVLLISSSEDLGIPITIHQTILPLVHCFGKGLCADGIDVLVRIGGVYGESFIVKQMLPLLKNVVGSFIDLSCMNKPDPVQSWSALALIDCLMTLDGLGAFLPEDVLIKELVEDQGRLHVGVLLQKHMEIAVLQVAATTLFALCQRIGPDMTVLHVLPKLKELFDELAFSREIVKDSTNVGRSLKVSKSKIGGELQIESRMDLVFLLYPSFASLLGIEKLRQCCATWLLLEQFLLRRHNWKCEYAGESPKNGSENIIARRPSIGKGATSEYNPAKLLLNGVGWSIPQSQGSRSSKKLIAQRGSYKVRKSQSVMPEGMPHQMNHEPWFWFPSPAKIWDAPEFLGRVGIQKDDLPWKIRASVIYSIRAHHGAVRSLAVCQDECTVFTAGIGHGYKGNVQKWELSQTNSLCSYHGHEEVVNDICILPSSGRVASCDGTVHIWNSQTGKQISVFAESQPESASLTSQLSSPLKINSDQANVLNLNTLSNGILSSAFDSNLYTCMHMLEFAKILVVGTGNGSLRFIDVAQGQKLHIWRGEPNESSFSTLISAICSSGSDKVQTGGVSNLPSLISTGLSSGHCKLFDAKSGNVVASWRAHDGYVTKLAAPEDHLLISSSLDRTLRVWDLRMNLPSQPIIFRGHSDGISSFSIWGQDVISISRNRIGLLSLSKSADETDGQHHITPQKLYISDNGTRTVGFTTLTNTLSSPDGGRFCLTSTARNMDVESSNIKKWIVLYPVYIDSKKTIAEGRRIGLNKACENPNCIEIRDCCDYLKLPNKIEPNKAYPRDFRLEGRVRVLLRKEDGTLYNPSISSRKQLMHTVAEMVPRHQGRTKKQEPASTSAAGPSKKPGKGGKKRR 1797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00383 1797 Pfam WD domain, G-beta repeat 1530 1566 IPR001680 GO:0005515
Bva06g00383 1797 Pfam WD domain, G-beta repeat 1351 1384 IPR001680 GO:0005515
Bva06g00383 1797 Pfam Beige/BEACH domain 356 568 IPR000409 -
Bva06g00383 1797 Gene3D BEACH domain 350 606 IPR036372 -
Bva06g00383 1797 MobiDBLite consensus disorder prediction 91 129 - -
Bva06g00383 1797 SUPERFAMILY BEACH domain 344 586 IPR036372 -
Bva06g00383 1797 ProSiteProfiles Trp-Asp (WD) repeats profile. 1535 1568 IPR001680 GO:0005515
Bva06g00383 1797 Pfam SRP19 protein 1674 1768 IPR002778 GO:0006614|GO:0008312|GO:0048500
Bva06g00383 1797 SMART WD40_4 1469 1525 IPR001680 GO:0005515
Bva06g00383 1797 SMART WD40_4 1528 1566 IPR001680 GO:0005515
Bva06g00383 1797 SMART WD40_4 1301 1344 IPR001680 GO:0005515
Bva06g00383 1797 SMART WD40_4 1347 1384 IPR001680 GO:0005515
Bva06g00383 1797 SMART WD40_4 1429 1466 IPR001680 GO:0005515
Bva06g00383 1797 CDD Beach 355 586 IPR000409 -
Bva06g00383 1797 Gene3D Transferase(Phosphotransferase) domain 1 210 349 - -
Bva06g00383 1797 CDD PKc 213 294 - -
Bva06g00383 1797 Gene3D Transferase(Phosphotransferase) domain 1 715 804 - -
Bva06g00383 1797 PANTHER GH12955P 3 1637 - -
Bva06g00383 1797 SUPERFAMILY Protein kinase-like (PK-like) 213 296 IPR011009 -
Bva06g00383 1797 ProSiteProfiles Protein kinase domain profile. 146 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00383 1797 SUPERFAMILY WD40 repeat-like 1278 1610 IPR036322 GO:0005515
Bva06g00383 1797 Pfam Protein kinase domain 213 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00383 1797 MobiDBLite consensus disorder prediction 1763 1797 - -
Bva06g00383 1797 ProSitePatterns Trp-Asp (WD) repeats signature. 1553 1567 IPR019775 -
Bva06g00383 1797 ProSiteProfiles BEACH domain profile. 342 615 IPR000409 -
Bva06g00383 1797 Gene3D - 1278 1401 IPR015943 GO:0005515
Bva06g00383 1797 Gene3D - 1402 1602 IPR015943 GO:0005515
Bva06g00383 1797 SMART Beach_2 354 586 IPR000409 -
Bva06g00383 1797 Gene3D - 1659 1779 IPR036521 GO:0006614|GO:0008312|GO:0048500
Bva06g00383 1797 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1535 1568 - -
Bva06g00383 1797 SUPERFAMILY Protein kinase-like (PK-like) 722 822 IPR011009 -
Bva06g00383 1797 SUPERFAMILY SRP19 1663 1770 IPR036521 GO:0006614|GO:0008312|GO:0048500
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00383 Bva-Chr6 4989822 5002168 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Cr Bva06g00383 Beach 9.6e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00383 K17601 - gmx:100810047 2543.84