Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00381 ATGGCTGAGAGCAGAAAGTACATTCGGACACAACTTTTAGAACTTGATGAGATACTACGAGAAGCAGAGCATCGTTGGCTTAGACCTGCAGAAATCTGTGAAATACTTCGCAATTATCAGAAGTTTGAGTTAACACCGGATCCACCTGTTAAGCCTCCAgCTGGATCACTATTCTTGTTTGATCGAAAAGCACTTCGTTACTTTCGCAAAGATGGTCACAgatggaggaagaagaaagatggcAAAACTGTGAAAGAAGCTCATGAAAAGTTGAAGGCCGGTAGTGTGGATGTTTTGCACTGTTATTATGCTCATGGGGAGGATAATGACAACTTTCAAAGGCGAAGTTATTGGATGCTTGATGAGCAGTTAGAGCACATTGTCCTTGTGCATTATCGAGAAATTAAAGAGGGCTACAACAAATGTGGCATCTCACGCTTGCCTCTAGATCCAGTATCCTTGGTTGGTAGCCCTCAGAATGGTTCAGCACCTTCCACTGCACAAGTAAATTCACCTGTTTCTGGTGTCCAAACATCTTATGCGTCAAGTGTGAATAGAGTTGATTGGAATGGACGAGCTTTATCTTCAGAGTATGAGGATGTTGACTCAGGGGGCGATCAACAAGCCTCATCTCACAATATCAGCAGCTCCAGATCTCACATTGGACCTCTTCTCACACATGAAGCCACTGGATTTGCTCAGAACACAAGGAACCCCTTTATTCCTTGGTCATGTTCTCTCCCTGATGTTTATCGTGGTACTGGCTCATCTCCATGGGCATCAGTTCAGAACTTTGGGAGAAATACAGTTAGCATACACAATGGAGATGGAGGATCCATTGGGAACTTCAAAACTGACTTCATTGTCCACAAGCTAAGTGATGCAAAATTAGATGCAGGCAAGGCAATCCAAGATGCTATGACTTGTGGAGATAGGCTGTTCACTCACATGCTTGTCCAGCCACTTGCAGGAGTTTCACAGACAGTAAATCAGGCACAAAAGGAGCATGATTTAAGTTCCATTCGTACTGAACCCCATGATCATACTGATCATCCAGGTGCTGCAACTTCTACCGTCCTTGTTGAACAAAAGTTCAAAGATGGTGGAACAGACAATGGCAAATCAGACTATGGTGAATTTGGAGAGCTGAAGAAACTTGATAGTTTTGGAAGGTGGATGGATAAGGAAATTGGTGTTGATTGTGATGATTCCTTGATGACTTCAGACTCTGGCAATTATTGGAATACACTGGATGCTCATAATGAGGATAAGGAAGTCACCAATTTCCGGCATATGCAATTGGATATGGATTCATTGGGCCCTTCTCTTTCACAAGAGCAGCTATTCAGCATCCATGATTTTTCTCCAGATTGGGCATATGCTGGGGTTGAAACGAAGGTTTTAATAGTTGGCACTTTTCTGGGGAGTAAGAAGCTTTCTGCTGAGACCAAGTGGGGATGTATGTTTGGTGAAATTGAGGTTTCTGCTGAAGTTTTGACAGATAATGTCATACGGTGTCAAACTCCTTTGCATTCGCCTGGCCGTGTTCCATTCTATGTTACCTGTAGTAATAGATTAGCCTGTAGTGAAGTAAGAGAATTTGAATATCGTGAAAACCCAATTAAATGTAACGGTCCTCTGGGAATTAGAATTACACCAGAAGAGGAAGTACATCTCCAACTGCGACTGCTTAAACTAGTAAACTTGGGACCTGACAAGAAGTGGTTTGATTGCTCTGTTACTGAATGTGAGAAATGTACGctcaaaggaaaaatatatttaatgaaagaCGATGGTAATATATTTCAAGACACACCCTACATCAATGAAAGTGATGTCATCAATCCTAGAGATGTGCTAGTTCAGCGATTATTGAGAGACAAGCTTTACGAGTGGTTGGTGTTTAAGGTTcatgaagaaggaaaaggaccAAACCTGTTGGATGATCAAGGACAAGGGGTAATACATTTGACAGCTGCTCTTGGTTATGTTTGGGCAATGGGCCCCATAGTTGGTGCTGGCGTCAACCCAAACTTTAGAGATGCCCGTGGAAGGACAGCACTACACTGGGCATCATACTTCGGGAGTGAAGAGACAGTGATTGCACTAGTCAAATTGGCTGCATCCCCAGGTGCTGTTGAGGACCCAACATCAGCATTTCCTCGAGGAGTAACAGCAGCTGATTTAGCTTCAAGCAGAGGACATAAAGGCATTGCTGGGTATTTGGCTGAGGCAGATCTGACAAGTCACTTCTCTACCTTGACTGTCAATAAACATGCGCTGGACAATATTGTTGCAACTATAGCAGTTGATAGTGCTTTTGAGACTGCACAGTCTGACTCATCTAATTTGACAAAGGACGAACACCACTTGAAAGAGTCTCTTGCTGCTTATCGTAAATCAGCTCGTGCAGCAGCATTAATCCAAGCTTCCTTTAGAGCACGCTCATTTCGTCAACGAGTTCTAACCCGTAGTAGCAGTGATACATCTGATGCAACTGTTGACCTAGTTGCAGCTGGCTGTTTGAACAAGATTCAGAATATGGGTCATTTTGAGGATTATCTGCATTCTGCAGCTTTAAGGATCCAAAGGAAATATCGTGGGTGGAAGGGAAGAAAGGAATTTTTGAAGATACGCAACCGTATTGTAAAAATTCAGGCCCATGTTAGAGGACACCAAGTTCGTAAGCAGTACAAAAAGGTTGTTTGGTCTGTTGGCATTGTAGAAAAGGCAATACTGCGTTGGAGGCGGAAAGGAGCTGGTCTGCGTGGATTTCGGGTTGGGCATACAGTTGGAACTGTGGCACCAGATTCTGAGAAAAGTGATGAATATGAATTTCTGAGCATTGGGCGGAAACAGAAATCTGATGATGTTGATAAAGCTCTGGCTAGAGTAAAGTCTATGGTTCGCAATCCAGAGGCACGTGATCAGTATGTGAGGCTCGTCAcgaagtttcaaaattttaagCAGATTGGTGATTGTGGAACTGATTA 2993 0.42 MAESRKYIRTQLLELDEILREAEHRWLRPAEICEILRNYQKFELTPDPPVKPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKTVKEAHEKLKAGSVDVLHCYYAHGEDNDNFQRRSYWMLDEQLEHIVLVHYREIKEGYNKCGISRLPLDPVSLVGSPQNGSAPSTAQVNSPVSGVQTSYASSVNRVDWNGRALSSEYEDVDSGGDQQASSHNISSSRSHIGPLLTHEATGFAQNTRNPFIPWSCSLPDVYRGTGSSPWASVQNFGRNTVSIHNGDGGSIGNFKTDFIVHKLSDAKLDAGKAIQDAMTCGDRLFTHMLVQPLAGVSQTVNQAQKEHDLSSIRTEPHDHTDHPGAATSTVLVEQKFKDGGTDNGKSDYGEFGELKKLDSFGRWMDKEIGVDCDDSLMTSDSGNYWNTLDAHNEDKEVTNFRHMQLDMDSLGPSLSQEQLFSIHDFSPDWAYAGVETKVLIVGTFLGSKKLSAETKWGCMFGEIEVSAEVLTDNVIRCQTPLHSPGRVPFYVTCSNRLACSEVREFEYRENPIKCNGPLGIRITPEEEVHLQLRLLKLVNLGPDKKWFDCSVTECEKCTLKGKIYLMKDDGNIFQDTPYINESDVINPRDVLVQRLLRDKLYEWLVFKVHEEGKGPNLLDDQGQGVIHLTAALGYVWAMGPIVGAGVNPNFRDARGRTALHWASYFGSEETVIALVKLAASPGAVEDPTSAFPRGVTAADLASSRGHKGIAGYLAEADLTSHFSTLTVNKHALDNIVATIAVDSAFETAQSDSSNLTKDEHHLKESLAAYRKSARAAALIQASFRARSFRQRVLTRSSSDTSDATVDLVAAGCLNKIQNMGHFEDYLHSAALRIQRKYRGWKGRKEFLKIRNRIVKIQAHVRGHQVRKQYKKVVWSVGIVEKAILRWRRKGAGLRGFRVGHTVGTVAPDSEKSDEYEFLSIGRKQKSDDVDKALARVKSMVRNPEARDQYVRLVTKFQNFKIGDCGTD 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00381 996 SUPERFAMILY Ankyrin repeat 636 745 IPR036770 -
Bva06g00381 996 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 17 982 - -
Bva06g00381 996 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Bva06g00381 996 Gene3D - 853 902 - -
Bva06g00381 996 MobiDBLite consensus disorder prediction 201 219 - -
Bva06g00381 996 ProSiteProfiles Ankyrin repeat profile. 683 715 IPR002110 GO:0005515
Bva06g00381 996 Pfam IQ calmodulin-binding motif 856 875 IPR000048 GO:0005515
Bva06g00381 996 Pfam IQ calmodulin-binding motif 881 899 IPR000048 GO:0005515
Bva06g00381 996 Pfam IPT/TIG domain 451 536 IPR002909 -
Bva06g00381 996 SMART ANK_2a 722 751 IPR002110 GO:0005515
Bva06g00381 996 SMART ANK_2a 683 712 IPR002110 GO:0005515
Bva06g00381 996 CDD IPT 450 538 - -
Bva06g00381 996 SMART CG_1_2 18 136 IPR005559 GO:0003677
Bva06g00381 996 MobiDBLite consensus disorder prediction 197 219 - -
Bva06g00381 996 SMART iq_5 854 876 IPR000048 GO:0005515
Bva06g00381 996 SMART iq_5 877 899 IPR000048 GO:0005515
Bva06g00381 996 SMART iq_5 800 822 IPR000048 GO:0005515
Bva06g00381 996 SUPERFAMILY E set domains 451 537 IPR014756 -
Bva06g00381 996 Gene3D - 617 754 IPR036770 -
Bva06g00381 996 ProSiteProfiles IQ motif profile. 878 902 IPR000048 GO:0005515
Bva06g00381 996 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Bva06g00381 996 Gene3D Immunoglobulins 444 542 IPR013783 -
Bva06g00381 996 ProSiteProfiles IQ motif profile. 855 884 IPR000048 GO:0005515
Bva06g00381 996 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 824 905 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00381 Bva-Chr6 4978010 4985480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00381 59 982 CAMTA Transcription Factor Family AT2G22300 39.816 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Bva06g00381 CG-1 4.6e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00381 K21596 - gmx:100818336 1404.81