Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00369 ATGATTGTGAGCCAGAAGATGGTTGCTGAAGCGGAAATTATCTGTCCGCAGAGCATTCCTATGTTGGATGTGAAGTATCATCTCTGTGTGGCGCAAGAACACAACGTCAAGGTTGAAGTTTCGCCCACCACACCTTCTGTTCCGATCTTTGGCGAAGTACGGGTCTCGTCAGAATCCATTTCTTCTGAAAAATCTTGCTTTGAATCGGCTGTTAATTGCTCAGAGATCATGAAGGATCCCATTTTAGAGACATCTGCTACCAAATTTCTCCCAAATATCCGTTCTGGCAGCTATGCTGAAATTGGGCCCCGGGGATCTATGGATGATGAACACATTCGAATAGATGATCTAGCTGCCCACCTGGGATTTGTGTTCAAGTGCCCTATGCCAAGTGCATTTTATGGAGTTTTTGATGGTCATGGAGGGCCTGACGCAGCTGCGTTTATCAAGAGGAATGCTAtgagattattttttgaagattcTGATCTACTGCAATCATATGATAATGATGCCTTGTTTCTGAAGAAGTTGGAGGATTCTCATCGAGGAGCATTTTTACGGGCAGACCTTGCCTTGGCTGATGAACAAACTGTTAGCAGTTCTTGTGGGACAACAGCATTGACTACTCTTATACTTGGAAGGCATTTGCTTGTTGCGAATGCTGGTGATTGTCGAGCTGTCCTCTGCAGGAGAGGAGTAGCTGTTGATATGTCTCGTGATCACAGACCGAGTTATTTGCCAGAACGGGTGAGAGTGGAGGAGTTAGGTGGTTTCATTGATGATGGCTATCTCAACAGTTATCTTTCGGTCACCCGAGCCCTTGGGGATTGGGACTTAAAATTCCCACTTGGTTCTGCATCACCACTTACTGCTGAGCCTGATGTTCAACAGGTAATTTTGACAGAGGACGATGAGTTCTTGATCATTGGGTGTGATGGGATTTGGGATGTAATGTCAAGCCAGGATGCAGTTAGTTTTGTTCGTCGTGGATTAAGAAGGCATGATGACCCACAACAATGTGCCAGAGAACTGGTTAAGGAAGCATTGCGCCTAAATACATCTGATAATCTCACTGTGATTGTTATATGCTTGTCTCCCATTGAAAGCATAGTTGAATCGTGTCCTCCCCCAAGGCGAAGATTCAGAGCATGTAGGCTGTCTGAAGAGGCTCGTAACAAATTGAGGAGCCTGCTAGAGGGCAATTG 1205 0.4481 MIVSQKMVAEAEIICPQSIPMLDVKYHLCVAQEHNVKVEVSPTTPSVPIFGEVRVSSESISSEKSCFESAVNCSEIMKDPILETSATKFLPNIRSGSYAEIGPRGSMDDEHIRIDDLAAHLGFVFKCPMPSAFYGVFDGHGGPDAAAFIKRNAMRLFFEDSDLLQSYDNDALFLKKLEDSHRGAFLRADLALADEQTVSSSCGTTALTTLILGRHLLVANAGDCRAVLCRRGVAVDMSRDHRPSYLPERVRVEELGGFIDDGYLNSYLSVTRALGDWDLKFPLGSASPLTAEPDVQQVILTEDDEFLIIGCDGIWDVMSSQDAVSFVRRGLRRHDDPQQCARELVKEALRLNTSDNLTVIVICLSPIESIVESCPPPRRRFRACRLSEEARNKLRSLLEGN 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00369 401 ProSitePatterns PPM-type phosphatase domain signature. 133 141 IPR000222 GO:0043169
Bva06g00369 401 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 7 388 - -
Bva06g00369 401 Gene3D - 79 367 IPR036457 -
Bva06g00369 401 ProSiteProfiles PPM-type phosphatase domain profile. 94 364 IPR001932 -
Bva06g00369 401 SUPERFAMILY PP2C-like 87 366 IPR036457 -
Bva06g00369 401 PANTHER PROTEIN PHOSPHATASE 2C 7 388 IPR015655 GO:0004722|GO:0006470
Bva06g00369 401 SMART PP2C_4 84 362 IPR001932 -
Bva06g00369 401 CDD PP2Cc 93 364 IPR001932 -
Bva06g00369 401 Pfam Protein phosphatase 2C 104 356 IPR001932 -
Bva06g00369 401 SMART PP2C_SIG_2 109 364 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00369 Bva-Chr6 4846935 4849294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00369 1 400 PP2C-type Phosphatase Gene Family AT1G48040 57.108 1.95e-149 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Bva06g00369 PP2C 9.8e-63 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00369 K14803 - gmx:100781949 649.432