Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00355 ATGCAAATTTTATCTGCAGATATGGATGTTACTCTCTGTCTCCTCACTTTATGCTTCTTCCTTCTAACTATTAAAGCATCAGCAATAACTTTGGAGCCTTATGAAGCTGACAGGGTAATTAATCTTCCTGGCCAACCTTCAAATGTATCAGTCTCCCACTTTTCTGGTTATATCACTGTCAATGAAGACCATGGGAGGGCCCTCTTCTACTGGTTCTTTGAAGCTCAATCTCAACCGTCCAACAAGCCCCTTCTTCTCTGGCTCAATGGAGGACCTGGATGCTCCTCTATTGGGTATGGAGCAGTTGTTGAGATAGGACCTTTTTTGGTAAACAAAAATGGTGATGGATTACACTTCAATCCCTACTCTTGGAATCAAGAAGCAAATTTGCTGTTTGTGGAATCCCCGGTTGGAGTTGGTTTCTCTTACACAAACACATCCTCTGATCTCACCATACTAGATGATAATTTTGTGGCTGAGGATGCCTACAAATTCTTGGTAAATTGGCTGCAAAAATTCCCACAGTTCAAATCCCGGGATTTCTTTATATCCGGAGAGAGTTATGCTGGCCATTATATTCCACAGCTGGCAGAGCTTATCGTTAATCGAAATAAAGATCAAACTAAGTAcccttttattaattttaaaggtTTTATTGTGGGGAATCCAGAAACTGATGATTACTATGACTACAAAGGCCTACTGGAATATGCATGGAGCCATGCCGTTATATCAAACCAGCAATACGACAAAGCAAAACAAGTTTGTGATTTTAAGAAATCCGATTGGTCAAGTGAATGCAACCTGGCAATGAACGAAGTTTTCCGAGTATTTTCCGAGATTGATATCTATAATATTTATGCGCCGGCATGTCGGTTAAATAAGACATCCTCAGCAGTTCATGACAGCAACGTTAACAACCCAGAATCACTCACTAAGGGGAGAAATGATTATAAACTAAAGAGGACGAGAATCTTTGGAGAAGGCTATGATCCATGTTATTCCAAATATGCAGAAGACTATTTCAATAGGATAGATGTGCAGTCATCTTTTCATGCAAGCATTAGAGGAGAAAACGCTAGGCTAAAATGGGCGACATGCAATGATTCCATATTGAGGACATATAACTACACTGTTTTTTCTGTCCTACCCATCTACACCAAACTCCTCAAGGGTGGCCTCAAGATATGGATTTACAgTGGTGATGCGGATGCCAGAGTACCAGTTATAGGGACACGAGACTGCATTGATTCTCTTGGATTACCTCTAAAATCTAGCTGGCGATCTTGGTATCATGATGATCAGGTTGGAGGAAGGATAGTGGAATATGAAGGGCTAACATGCGTGACAGCGAGAGGAGCAGGTCATTTGGTGCCGCTGAACAAGCCCAGCGAGGCTCTCTCCCTTATTCATTCTTTCTTATCAGGAGAACATCTCCCTACTACTCGTCCATG 1454 0.4113 MQILSADMDVTLCLLTLCFFLLTIKASAITLEPYEADRVINLPGQPSNVSVSHFSGYITVNEDHGRALFYWFFEAQSQPSNKPLLLWLNGGPGCSSIGYGAVVEIGPFLVNKNGDGLHFNPYSWNQEANLLFVESPVGVGFSYTNTSSDLTILDDNFVAEDAYKFLVNWLQKFPQFKSRDFFISGESYAGHYIPQLAELIVNRNKDQTKYPFINFKGFIVGNPETDDYYDYKGLLEYAWSHAVISNQQYDKAKQVCDFKKSDWSSECNLAMNEVFRVFSEIDIYNIYAPACRLNKTSSAVHDSNVNNPESLTKGRNDYKLKRTRIFGEGYDPCYSKYAEDYFNRIDVQSSFHASIRGENARLKWATCNDSILRTYNYTVFSVLPIYTKLLKGGLKIWIYSGDADARVPVIGTRDCIDSLGLPLKSSWRSWYHDDQVGGRIVEYEGLTCVTARGAGHLVPLNKPSEALSLIHSFLSGEHLPTTRP 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00355 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Bva06g00355 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 120 132 IPR001563 GO:0004185|GO:0006508
Bva06g00355 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 446 459 IPR001563 GO:0004185|GO:0006508
Bva06g00355 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 143 IPR001563 GO:0004185|GO:0006508
Bva06g00355 484 Gene3D - 333 371 - -
Bva06g00355 484 SUPERFAMILY alpha/beta-Hydrolases 39 479 IPR029058 -
Bva06g00355 484 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 481 IPR001563 GO:0004185|GO:0006508
Bva06g00355 484 ProSitePatterns Serine carboxypeptidases, serine active site. 183 190 IPR018202 GO:0004185
Bva06g00355 484 Pfam Serine carboxypeptidase 43 476 IPR001563 GO:0004185|GO:0006508
Bva06g00355 484 Gene3D alpha/beta hydrolase 33 293 IPR029058 -
Bva06g00355 484 Gene3D - 382 476 - -
Bva06g00355 484 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 26 12 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00355 Bva-Chr6 4742434 4745434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00355 363 479 Calmodulin-binding Proteins AT2G22960 33.051 5.00e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00355 K16297 - gmx:100815141 806.594