Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00333 ATGGAGAAGAGAGAAGCAGAGAACAAATCCACCATTGAGATTGAGAATTCCATTTCCATGGCGACATTTTCCGATGAGATTCCGAGCACTTGCAGTTACCCTTTTACGAGCATCTTTGACATGCCATGTGATCAACCTGACAAGGCTTCTTCTTTTGGCTTCATGGACTTGCTAGCTACCCAAGATTATACCCCTTCTTTATTCGATTGGCTTCCGACCACCGCCGCTGCCGCCACCAACCCCACCACCACCTCCACGACTTCTTCCATGCCAGTCACCCACCCTCTTCCGTCGCCGGCGAGCTCCAATGTCCCCGACAGCTCCGAGGTTTTGAACACCCCCATGTCCCCCAATTCTAATTCTTCGATTTCTTCATTGTCCAATGAATTGGCAACGCCGACCAACATGGATGAGCAACAGAGTAACAATGATAAACTAGTAGggaatgaagaagatgaagatggagATGGAGGCAGAGGAGACGACCAAGATCAAGACAAGACTAAGAAACAGctgaaaccaaaaaagaagaaccaaaaaaagcAAAGGGAACCAAGATTTGCGTTCATGACAAAGAGTGAAGTTGATCATCTAGACGACGGGTACAGATGGCGCAAGTACGGACAAAAAGCTGTAAAAAACAGCCCCTATCCCAGGAGCTATTATCGTTGCACCACCGCGGGATGCGGCGTCAAGAAGCGGGTGGAGCGGTCCTCCGATGACCCTTGTATTGTTGTAACCACCTACGAAGGCCAACACACCCACCCTTCTCCGGCGACGTCTCGAGCAAGCCTTGGAGCATTCATGCAGCACGAATCTACAGCTGGTGGGTTCGGGCCCACGGGCAGCAGTGGTGGCGCTCTTGGTTCTCCACACTTTGTCGGAACCCAACAGTTACAATTGCAGCCACATCATCATCAATTTCAGCAGCAAGCGGCTTTGTTGTATAGCGCGCCCCCGGCTTTGACTAATTACATGAACATGAATTCTTCGAGTTTTACGAGCTTTATTCAAGAGAATCGACCAGGATTTGGGCCATCCACTATGTCGGCCGGTCAAGCTTTGTTGAGGGATAATGGGCTTCTTCAGGACATTGTGCCATCACAAATGAGaaaggaggagaagaaagatgacta 1136 0.4674 MEKREAENKSTIEIENSISMATFSDEIPSTCSYPFTSIFDMPCDQPDKASSFGFMDLLATQDYTPSLFDWLPTTAAAATNPTTTSTTSSMPVTHPLPSPASSNVPDSSEVLNTPMSPNSNSSISSLSNELATPTNMDEQQSNNDKLVGNEEDEDGDGGRGDDQDQDKTKKQLKPKKKNQKKQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDPCIVVTTYEGQHTHPSPATSRASLGAFMQHESTAGGFGPTGSSGGALGSPHFVGTQQLQLQPHHHQFQQQAALLYSAPPALTNYMNMNSSSFTSFIQENRPGFGPSTMSAGQALLRDNGLLQDIVPSQMRKEEKKDD 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00333 378 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 49 368 - -
Bva06g00333 378 Pfam WRKY DNA -binding domain 199 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva06g00333 378 SMART WRKY_cls 198 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva06g00333 378 Gene3D WRKY domain 182 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva06g00333 378 ProSiteProfiles WRKY domain profile. 193 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva06g00333 378 MobiDBLite consensus disorder prediction 79 143 - -
Bva06g00333 378 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 49 368 IPR044810 GO:0003700
Bva06g00333 378 SUPERFAMILY WRKY DNA-binding domain 190 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva06g00333 378 Coils Coil 376 378 - -
Bva06g00333 378 MobiDBLite consensus disorder prediction 79 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00333 Bva-Chr6 4641137 4643043 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00333 23 374 WRKY Transcription Factor Family AT2G47260 40.642 1.99e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva06g00333 WRKY 2.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00333 - - gsj:114394278 300.056