Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00331 ATGCTCTCTTCTGATTCCTTTATAAGCGTCTCCCACCGTTTCTCTCTCCCTTCAACCTCCAAACCAAGGGACACCTCACCCACTCCGTTCCGTTCTCGGTCACAACCCTACCGTTACCTCCACcacctctctctcttctctcattCATTCTTCCAAGCTCTTCGAATTATAAAATCCTCGGTGGTTATCCCTCAAAGGTTTCTCTCATCTACATCATCGTCCCAGGCCCAGAAATACaaattcctttctttccttttctttcacctCCCAGAGAAGGAAAATTCCAAACGGAATCGGAGATTGGGCGTTTACATGGCATCATCTCTGATCTCAAATGCCGTAACGAGCTCTGATCGATCACGTGACATATccaggaggaagaagaagaagaaagctcaGCTCAAGCACCAGCAAGAAGATCAGAATCATATCAAATGGAAATCCCAGGCTCAACAACAAATCTACTCCTCCAAGCTCCGCCAAGCCTTGGCTAGAGTCAACCTCGGCTCTTCTAGTTCCAGCGCCAGTGAAGCGCCACGCCGCGGGAAAGCCGTACGCGAAGCTGCCGATAGAGTTCTGGCTGTGACGGCCAAGGGGAGGACTCGATGGAGCCGAGCGATTTTAATGAATCGGCTCAAACTTAAGTTCCGTAAACATAAGAGGCAGAGGGTTACGGCAGTCACCGGCGCCGGTAGAACCCGGTCGAAGAAACCGAGAGTTAGCGTTTACCGACTGAAGGGGAAGAGTTTACCGACTGTGCAGAGAAAAGTGAGGTTCCTTGGTCGGCTGGTTCCAGGTTGCCGGAAACAACCGTTGCCGGTGATTTTGGAGGAAACCATTGATTACATATCGGCGCTTGAGATGCAGATTCGAGCCATGAGCACCCTCGCTGACTTACTCTCTGGGTCTAGTTCTGGCGCCGGGTCTAGTTCCGCGCCGCCACCTGGTTG 950 0.4779 MLSSDSFISVSHRFSLPSTSKPRDTSPTPFRSRSQPYRYLHHLSLFSHSFFQALRIIKSSVVIPQRFLSSTSSSQAQKYKFLSFLFFHLPEKENSKRNRRLGVYMASSLISNAVTSSDRSRDISRRKKKKKAQLKHQQEDQNHIKWKSQAQQQIYSSKLRQALARVNLGSSSSSASEAPRRGKAVREAADRVLAVTAKGRTRWSRAILMNRLKLKFRKHKRQRVTAVTGAGRTRSKKPRVSVYRLKGKSLPTVQRKVRFLGRLVPGCRKQPLPVILEETIDYISALEMQIRAMSTLADLLSGSSSGAGSSSAPPPG 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00331 316 CDD bHLH_AtIBH1_like 244 297 IPR044549 GO:0006355
Bva06g00331 316 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 120 313 IPR044660 GO:0006355
Bva06g00331 316 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 257 302 IPR036638 GO:0046983
Bva06g00331 316 MobiDBLite consensus disorder prediction 116 147 - -
Bva06g00331 316 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 120 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00331 Bva-Chr6 4610401 4611553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00331 143 315 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 57.692 6.32e-55 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00331 - - gmx:100803765 256.914