Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00324 ATGCTTCAGGCATTGATGAATCTGCTCTCTCTGTGTTGGAAGCCATTCGGGCGCGGTTCTGAGAACTTAGATTCTGTTGGAGTTATCGGGGGCAATTTCGGTGGTGGGGCTGGCGGAAGAGAAGGTAAAGATGGTTTACTTTGGTTCCGCGATATCGGAAAGTACGGTTCCGGCGAATTCTCGATGGCAGTGGTCCAGGCAAACCAGGTCCTTGAAGACCAGAGCCAGATCGAGTCTGGTCCTTTGGGAACCTTCGTCGGTGTGTACGATGGACATGGTGGCCCCGATGCATCTCGATACGTCTGTGATAACTTGTTTCGACATTTTCAAGCAATATCAGCTGAGTCACGGGGTGTTGTGACAACTGAGACTATTCAAAGAGCATTTCTCCGAACGGAAGAGGGGTTCAATGCCCTTGTGTCAGAATTATGGAGTACTCGACCTAGTATTGCAACTGTTGGGACATGTTGTCTAGTTGGAGTGATATTTCAACAGACCCTCTTTGTGGCAAACCTCGGAGATTCCCGTGTTGTGTTGGGTAAGAAAGTTGGCAATACTGGAGGTATGGCTGCAATTCAGCTATCTACAGAACACAATGCAAATCTCGAGGCAATCAGGCATGAACTCAAGGAATTACACCCAGATGATCCGCAAATTGTTGTCCTCAAACATGGAGTGTGGAGAGTTAAAGGCATTATTCAGGTCTCTAGATCTATAGGTGAcgtatatatgaaaaattcgCAGTATAACCGGGAACCAATTAATGCAAAATTCAGACTTCCTGAACCAATGAACATGCCTATCTTGTCTGCTAATCCAACTATTATTTCTCACCCTCTCCAGCCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACCTGAGTAATGAAAAAGCAGTGGATATTGTTCATAACAATCCACGCTCGGGTAGTGCCAAGAGGCTTGTCAAGGCTGCCCTCCACGAAGCAGCAAGAAAACGAGAAATGCGATACTCCGATCTCCGGAAGATTGACAAGAAGGTCCGACGCCATTTTCATGACGATATAACTgttattgttttattcttgAACCACGACCTGATATCCAGAGGCACGGTGCTAGACCCGCCACTGTCAGTTCGAAGTGCTCTCGATCACTG 1151 0.4553 MLQALMNLLSLCWKPFGRGSENLDSVGVIGGNFGGGAGGREGKDGLLWFRDIGKYGSGEFSMAVVQANQVLEDQSQIESGPLGTFVGVYDGHGGPDASRYVCDNLFRHFQAISAESRGVVTTETIQRAFLRTEEGFNALVSELWSTRPSIATVGTCCLVGVIFQQTLFVANLGDSRVVLGKKVGNTGGMAAIQLSTEHNANLEAIRHELKELHPDDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKNSQYNREPINAKFRLPEPMNMPILSANPTIISHPLQPNDSFLIFASDGLWEHLSNEKAVDIVHNNPRSGSAKRLVKAALHEAARKREMRYSDLRKIDKKVRRHFHDDITVIVLFLNHDLISRGTVLDPPLSVRSALDH 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00324 383 ProSiteProfiles PPM-type phosphatase domain profile. 56 360 IPR001932 -
Bva06g00324 383 Pfam Protein phosphatase 2C 83 331 IPR001932 -
Bva06g00324 383 SUPERFAMILY PP2C-like 68 361 IPR036457 -
Bva06g00324 383 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 3 383 - -
Bva06g00324 383 PANTHER ALPHABET, ISOFORM E-RELATED 3 383 - -
Bva06g00324 383 ProSitePatterns PPM-type phosphatase domain signature. 85 93 IPR000222 GO:0043169
Bva06g00324 383 Gene3D - 51 368 IPR036457 -
Bva06g00324 383 SMART PP2C_4 46 358 IPR001932 -
Bva06g00324 383 CDD PP2Cc 60 360 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00324 Bva-Chr6 4578325 4582420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00324 1 313 PP2C-type Phosphatase Gene Family AT3G17090 72.843 5.43e-162 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00324 K01102 - gmx:100790813 669.077