Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00318 ATGACTCCATCTTTTAAGATTCCATTCCGGAAGGAAATTCTACTGGGTTATCGTCATATTAGGAAAGGAATATACAGAGAAAAGGTACACATACCAAAGAACAAACCCTACATATTCATGAGAGGgaatggaaaaggaagaacCATAATAGTCTGGTCTAAGAGCTCTTCAGACAATGTGGCTTCTGCTATCTTTAGGCATGAAACTCACGATTTCATTGCCTTTGGTATCAGCTTCAAGGGATTGCTTATACTTCGCAAAATCAATCAGTA 272 0.3566 MTPSFKIPFRKEILLGYRHIRKGIYREKVHIPKNKPYIFMRGNGKGRTIIVWSKSSSDNVASAIFRHETHDFIAFGISFKGLLILRKINQ 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00318 90 Pfam Pectinesterase 19 80 IPR000070 GO:0030599|GO:0042545
Bva06g00318 90 PANTHER PECTINESTERASE 67-RELATED 19 80 - -
Bva06g00318 90 SUPERFAMILY Pectin lyase-like 19 81 IPR011050 -
Bva06g00318 90 Gene3D - 17 83 IPR012334 -
Bva06g00318 90 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 19 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00318 Bva-Chr6 4551996 4554137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00318 19 80 Carbohydrate Esterase AT2G47040 40.299 6.97e-09 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00318 - - jre:108994779 112.079