Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00317 ATGATTCCTGCTACATTTAAGAGCTGTGAGATATTTGTTAGTGACGACAAGCGGGTGATAATTCATGGGGAAAGTCTAGGCATTGGTGTTGTGTACTTGGGAAGGGCTAAGGGTGCTTATTCTTGGGTGCCTTTTGCAAATACATATCTCTCTAAGACCATTGTCTCTGGGGGTTGGACTGATTGGAGCTATGCTGGTGGCACAGAAAATCTGTTCCATGCGGAGTACAAGTGCCTTGTACCTGGATCTGAGTCAAATGGGCGTGCTTCTTGGTCAAAGCAGCTTAAGGACAAAGAAGCTGCTTCCATTTTGTCTATTAACTATATTCATGGCACGAAATGGCTGCCAGTGTGGTTATA 359 0.4457 MIPATFKSCEIFVSDDKRVIIHGESLGIGVVYLGRAKGAYSWVPFANTYLSKTIVSGGWTDWSYAGGTENLFHAEYKCLVPGSESNGRASWSKQLKDKEAASILSINYIHGTKWLPVWL 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00317 119 Pfam Pectinesterase 30 110 IPR000070 GO:0030599|GO:0042545
Bva06g00317 119 SUPERFAMILY Pectin lyase-like 4 117 IPR011050 -
Bva06g00317 119 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 19 118 - -
Bva06g00317 119 Gene3D - 4 118 IPR012334 -
Bva06g00317 119 PANTHER PECTINESTERASE 67-RELATED 19 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00317 Bva-Chr6 4551219 4551902 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00317 29 115 Carbohydrate Esterase AT5G07410 36.782 7.75e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00317 - - csin:114270311 154.451