Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00299 ATGGATGATCTGTGTTCTTTTATTGGGTTCAATATTGGTGATGCTGATGATGAACATAGTTCATCTAATGATGACTATTTGGGTACAAAGGAACTGAATGAAGGGAAAGAGGTTCAATTTTCTGGAGCTGAAGGTTGGGGTGACTCTGGGGGAACTAGTTCCCTTTGCTCTAATTTTGGATTCAATCCTGATGATATATCAGAAGAAGGATATCTTTTGTCTCCTCATCAACAAAAGGATCTGCAGCAAATGCCAGATATTGATTATGAAACGTTGGATAACCTGCAGTTTGATATGGTCCCGCCACTGCTTCAAGATAATATGAACTCTGATCAACTTCCAAGTATGGTTCCAGTAAGTGAATCAATTAACGACAAACCATGTTCTTTGCCTCTTGCCTCACTTGAGCTCCTGAACAACTATGGCTGTGGGTTCAAACGCTTAAATGGCGAAAGAAATTTTCAGACAGTAGATGACTCGGTGGCCACAGATGTGGAGAGAAAGTTGTCAACTGAAGATATAATAAGAATAGCTGGAAAGAGGTTCATTCAATCGTCTTCAGAATCAGTTGATTTTCATCCCTATGATTCTTGTTTCTCTAGACTCTCtcatgaagaaaaagaggatGTTGAACTTGCTGAATCCCTTTTGGCTTCTGCTGAGAAAATAGCCTATCAACAGTTTGAACGTGCGAGCACATTGCTTAATCACTGTGAATCATTGTCTTCCAAGACTGGGACTGCAGTTAAGCGTGTTGTTGCTTATTTTTCTGATGCACTTCGTGAGAGGCTACATCGAGAAACAGGAAGAATTTCAGCGAAAGTTTTATCTCAAAGACAGTCATTTGATCCAGATCAGGCGATGAAGAGTCCAAACCCCACTTCTTTAGCATGTCATGCAAAGCTTCCTTTTTGTCAGGTCTCATTTTTCTGTGAAGTCCAAGCCATTATAGACAATTCAATGGATGCAAAGAAGATTCATATTATAGATTTTGCAATCAAAGATGGGGTGAACTGGTCGATCCTGATGCAAGCCCTTGAATCTCGACATAATGGTCCAGTTGAGCTTCTAAAAATAACAGCTGTTGGCACTACTTCAAAGCATTTACTTGAGGATGTAGGTAAGAGACTGATGAATTTCGCCCAGACCATGAATATACCTTTCTCATTCAAGATCGTTATGGTATCAAACATGCTAGATCTCAATAAAGATCTCTTTGAGATAGATCCTGAGGAAACAATTGTTGTTTCCTCTCATTTCAGACTGAAAAGGATGCTGTCACAACCAGACCATCTTGAATCTGTTATGAAAGTGATCCAAAACATCAAACCTGCTGTAATGGTGGTCACTGAGGTTGAGGCAAACCACAATGCAACATCTTTTGTGAACCGTTTCACTGAAactcttttctatttcagTGCATACTTTGACTGCCTTGACACTTGTATGAAAAAGGATGATGCAAACAGAATGATTTTGGAATCAGTATACTTCGGCCATGGGATTAGAAATATTGTGGCTATGGAAGGAGATGAAAGAAAGATTCGAAATGTAAAGATTGATGTTTGGAGGGCTTTTTTCGAGCGGTTTGGAATGGTGGAGAAAGAATTGAGCATGTCATCCTTATACCAAGCGGAGCTTGTGGCTAAAAGGTTTGCTTGTGGGAGTTCTTGTACATTTGAAATGAATGGGAATTGCCTGCTTATTGGATGGAAGGGTACACCACTTCATTCTCTTTCTGTTTGGGAATTTCTTGATGATGATTG 1766 0.3907 MDDLCSFIGFNIGDADDEHSSSNDDYLGTKELNEGKEVQFSGAEGWGDSGGTSSLCSNFGFNPDDISEEGYLLSPHQQKDLQQMPDIDYETLDNLQFDMVPPLLQDNMNSDQLPSMVPVSESINDKPCSLPLASLELLNNYGCGFKRLNGERNFQTVDDSVATDVERKLSTEDIIRIAGKRFIQSSSESVDFHPYDSCFSRLSHEEKEDVELAESLLASAEKIAYQQFERASTLLNHCESLSSKTGTAVKRVVAYFSDALRERLHRETGRISAKVLSQRQSFDPDQAMKSPNPTSLACHAKLPFCQVSFFCEVQAIIDNSMDAKKIHIIDFAIKDGVNWSILMQALESRHNGPVELLKITAVGTTSKHLLEDVGKRLMNFAQTMNIPFSFKIVMVSNMLDLNKDLFEIDPEETIVVSSHFRLKRMLSQPDHLESVMKVIQNIKPAVMVVTEVEANHNATSFVNRFTETLFYFSAYFDCLDTCMKKDDANRMILESVYFGHGIRNIVAMEGDERKIRNVKIDVWRAFFERFGMVEKELSMSSLYQAELVAKRFACGSSCTFEMNGNCLLIGWKGTPLHSLSVWEFLDDD 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00299 588 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 41 583 IPR005202 -
Bva06g00299 588 Pfam GRAS domain family 213 583 IPR005202 -
Bva06g00299 588 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 41 583 - -
Bva06g00299 588 ProSiteProfiles GRAS family profile. 203 583 IPR005202 -
Bva06g00299 588 ProSiteProfiles S4 RNA-binding domain profile. 156 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00299 Bva-Chr6 4453451 4455217 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00299 206 584 GRAS Transcription Factor Family AT3G03450 31.854 3.85e-63 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva06g00299 GRAS 2.4e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00299 - - gmx:100818523 658.677