Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00281 ATGGCAAATAACTTGACGGGGCTGCTCGTGGGCTCGGAGATACATGGATTCCATACAATGCAAGATCTGGATGTGAGGAACATTATGGAGGAAGCAAACACCAGATGGCTTCGTCCCAATGAGATTCATGCCATACTCTGTAATTACAAGTATTTCACTATCAATGTCAAGCCAGTGAATTTGCCCAAAAGTGGCACTATTGTATTATTTGACCGTAAGATGCTTAGGAACTTTCGGAAAGATGGACACaactggaaaaagaaaaaggatgggAAAACTGTTAAGGAAGCTCACGAGCACTTGAAaGTTGGTAATGAAGAAAGGATACATGTATACTATGCACATGGCCAAGATAACTCGAGCTTTGTCCGTAGATGTTATTGGCTTCTTGACAAgAGTTTGGAACACATTGTCCTTGTTCACTATCGTGAAACACAGGAgATGCAAGGTTCTCCAGTCACACCTGCTTATTCAAATTCTAGTTTTGCCTCTGATGCAACGGCTCCATTGATTTTAACAGAGGAGTTAGAATCAAGGACCAATGATGAATATGCTAGTGAGGGAAATGACCGTCTAAAAGTACAAAGCCATGAATTGAGGCTTCATGAGATTAATACACTTGAATGGGATGATCTAGTGGTTTCAAGTGATCTTAACACCTCTCCTGCACCTAATGGAGGCAAAGTTTCACCTTATGATCTACAAAATCAAACTTTACTGAATGGCAGTTTGAGTAATgtAATGAGCAATTCTTGCGTAGAAAATCCTTCTTTTAATAGTTTGACCGAGTCAATAGTTGGGAGCAATGGTGTACCTTACAAATTTCAAGAAAGttcaaatcttcaaaaattgGAAAATCAAGTAAATCCAAATGTGCAGAGCGGGCATCCTATCTCTATGTGTGGTGTTGATCCCATGGAAACTTTTGTTAATGATGCTTTGCAAAGTCAGGACAGCTTTGGAAGGTGGATAAACCACATCATCTCTGATTCACCATGTTCTGTCGATGAGTCAGCTATCGAATCCTCTGTTTCATCTGTTCATGATCCATATTCTCCTCCGGTAGTGGATCATCTTCAACCTTCTTTACCAGAACAAGTATTTAATATCACTGATGTGTCTCCTGGATGGGCATTTTCCACTGAGAAAACCAAGGTCCTGGTCACTGGGTTTTTTCATGATGACTATCTACACCTTGCGAAGTCCAATCTGTTGTGCGTCTGTGGTGATGTGAGTGTACCTGCAGAAATAGTTCAGGTTGGGGTCTACCGATGTTGGGTATCACCACATTCCCCCGGATTTGTGAATCTCTATATGAGTTTGGATGGCCATAAGCCTATCAGCCAAGTTGTTAATTTTGAGTATCGCACTCCTATGTTGCATGATCCTACAGCTTATTTAGAAGAGAATTACAATTGGGAAGAGTTTCAAGTTCAGATTAGACTtgcttatttgatttttgctACACAAAAGAGCCTTGATATTTTCTCTAGTACAGTATCATCTAATGCACTTAAGGCAGCTAAGCAATTTGCCTTCAAAACCTCTTATATTTCCAAAAGTTGGCAACTCTTGATCAAGTCAATTGAAGAGAACAAAACTCCATTTCCTCAAGCAAAAGATGCATTGTTTGAGATTGCATTGAAAAACAGACTAAAGGAATGGTTGTTGGAAAGGATTGTCTTGGGCTCAAAGACTACTGAATATGATGCTCAAGGTCAAGGTGTAATCCATTTGTGCGCAATGTTGGGATATTCTTGGGCTATTTCCTTGTTTTCATGGTCAGGCCTGTCACTGGATTTTCGTGATAAATTTGGATGGACAGCTCTTCATTGGGCAGCATATTGTGGAAGGGAGAAGATGGTTGCAACTTTGTTGTCTGCTGGCGCAAGGCCAAACCTGGTCACAGATCCTACTCCACAAAATCCTGGTGGATGTACTGCTGCAGATTTGGCTTATATGAAGTCTTATGATGGCTTAGCTGCATATCTTTCAGAAAAGTCTCTGGTTGAGCAGTTCAATGACATGAGCTCAGCTGGAAATATCAGTGGCTCACTGGAAACAAGGTCAACTGATCCAGTAAACTCTGCAAATCTCACTGAGGACCAGCTGTATATGAAGGAAACGCTGGCAGCTTACCGGACAGCTGCTGAGGCAGCAGCACGCATACAAGCTGCATTTAGGCAGCACTCTCTAAAATTACGGACCAAAGCTGTTTGGCTTAGCAATCCTGAGGCTGAGGCACAGAAGATAATTGCAGCAATGAAGATTCAACATGCCTTTCGCAACTTTGAGAATAAGAAGGTGATGGCTGCTGCTGCTCGTATCCAGCATTCATTCCGTACATGGAGGACACGTAGAGAATTTCTCAACATGCGTCGTCAGGTTGTCAAAATTCAAGCTGCTTTTCGGGGTTTCCAAGTGCGGAGGCAATACAGTAAAATTCTTTGGTCTGTAGGAGTGCTTGAGAAAGCAATCCTGCGTTGGCGTTTTAAGAGAAGAGGCTTCCGTGGGCTACAAGTTAACCCTGCTCCACAAATGGAAGATCAAAGGCGGGAAAGTGATACGGAGGAGGACTTCTTCAAGACCGGCAGGAAACAAGCTGAAGAACGTGTTGAGAGATCTGTAGTGCGTGTTCAGGCCATGTTCCGTTCCAAGAAAGCTCAAGAAGAGTATAGGAGGATGAAGTTGACCCATAATCAAGTGAAGCTGGAATTTGAAGAGCTTATAAATCCTGATACTGAAATGGAACAGAGATA 2759 0.4132 MANNLTGLLVGSEIHGFHTMQDLDVRNIMEEANTRWLRPNEIHAILCNYKYFTINVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQDNSSFVRRCYWLLDKSLEHIVLVHYRETQEMQGSPVTPAYSNSSFASDATAPLILTEELESRTNDEYASEGNDRLKVQSHELRLHEINTLEWDDLVVSSDLNTSPAPNGGKVSPYDLQNQTLLNGSLSNVMSNSCVENPSFNSLTESIVGSNGVPYKFQESSNLQKLENQVNPNVQSGHPISMCGVDPMETFVNDALQSQDSFGRWINHIISDSPCSVDESAIESSVSSVHDPYSPPVVDHLQPSLPEQVFNITDVSPGWAFSTEKTKVLVTGFFHDDYLHLAKSNLLCVCGDVSVPAEIVQVGVYRCWVSPHSPGFVNLYMSLDGHKPISQVVNFEYRTPMLHDPTAYLEENYNWEEFQVQIRLAYLIFATQKSLDIFSSTVSSNALKAAKQFAFKTSYISKSWQLLIKSIEENKTPFPQAKDALFEIALKNRLKEWLLERIVLGSKTTEYDAQGQGVIHLCAMLGYSWAISLFSWSGLSLDFRDKFGWTALHWAAYCGREKMVATLLSAGARPNLVTDPTPQNPGGCTAADLAYMKSYDGLAAYLSEKSLVEQFNDMSSAGNISGSLETRSTDPVNSANLTEDQLYMKETLAAYRTAAEAAARIQAAFRQHSLKLRTKAVWLSNPEAEAQKIIAAMKIQHAFRNFENKKVMAAAARIQHSFRTWRTRREFLNMRRQVVKIQAAFRGFQVRRQYSKILWSVGVLEKAILRWRFKRRGFRGLQVNPAPQMEDQRRESDTEEDFFKTGRKQAEERVERSVVRVQAMFRSKKAQEEYRRMKLTHNQVKLEFEELINPDTEMEQR 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00281 919 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 15 917 - -
Bva06g00281 919 ProSiteProfiles CG-1 DNA-binding domain profile. 25 151 IPR005559 GO:0003677
Bva06g00281 919 SMART iq_5 768 790 IPR000048 GO:0005515
Bva06g00281 919 SMART iq_5 871 893 IPR000048 GO:0005515
Bva06g00281 919 SMART iq_5 791 813 IPR000048 GO:0005515
Bva06g00281 919 SMART iq_5 715 737 IPR000048 GO:0005515
Bva06g00281 919 Gene3D - 531 674 IPR036770 -
Bva06g00281 919 SMART CG_1_2 28 146 IPR005559 GO:0003677
Bva06g00281 919 Pfam IQ calmodulin-binding motif 794 812 IPR000048 GO:0005515
Bva06g00281 919 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 15 917 - -
Bva06g00281 919 ProSiteProfiles IQ motif profile. 770 798 IPR000048 GO:0005515
Bva06g00281 919 ProSiteProfiles Ankyrin repeat region circular profile. 605 633 - -
Bva06g00281 919 ProSiteProfiles IQ motif profile. 873 901 IPR000048 GO:0005515
Bva06g00281 919 MobiDBLite consensus disorder prediction 844 866 - -
Bva06g00281 919 ProSiteProfiles Ankyrin repeat profile. 605 637 IPR002110 GO:0005515
Bva06g00281 919 Gene3D Immunoglobulins 364 459 IPR013783 -
Bva06g00281 919 Gene3D - 766 816 - -
Bva06g00281 919 ProSiteProfiles IQ motif profile. 792 816 IPR000048 GO:0005515
Bva06g00281 919 SMART ANK_2a 605 634 IPR002110 GO:0005515
Bva06g00281 919 SUPERFAMILY E set domains 369 456 IPR014756 -
Bva06g00281 919 Coils Coil 885 905 - -
Bva06g00281 919 MobiDBLite consensus disorder prediction 848 866 - -
Bva06g00281 919 SUPERFAMILY Ankyrin repeat 547 667 IPR036770 -
Bva06g00281 919 Pfam Ankyrin repeats (3 copies) 554 634 IPR002110 GO:0005515
Bva06g00281 919 Pfam CG-1 domain 31 144 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00281 Bva-Chr6 4346765 4355083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00281 28 906 CAMTA Transcription Factor Family AT3G16940 56.073 0.0 972
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Bva06g00281 Ank_2 1.7e-06 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00281 K21596 - gmx:100793970 1394.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01302 05 6823230 6830873 Bva06g00281 06 4346765 4355083 BWGD