Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00271 ATGGGAGTAGAGAAAGAAGGGACAAAAAGTGGAGGAGGATATGTCGGAGGCTTTCTCCAGTTGTTTGACTGGAGCTCAAAATCtcgaaagaaattatttgcaaaCAAATCAGATTTACCAGAGTCTTCGAAACAGGGGAGGAAAGTTAATGGCAACTTGGCAATGACACGGCCATACGTGGtggatgaagatgaaataGGACTTGGGTCAAGTGTTAGAGGAAGTAGTGATCATAGTTATGCTTCATCTGTTACAGATGATGAAGTATGTGGAGCAAGGGTACCCAGCGTAGTTGCCAGACTTATGGGATTAGATTCATTACCAACTTCCAATTTTCTCGATCCTTATTCTACCCCATATTTTGATACTCGATCCCTTCAAGACTCCCAATATAGCAGGAGAAATCTAAATTATCAGCATGACCATCAGAGTGTTTACTCTGGAAATTTGCTAGAAAAGGTTGAGGGGTCTTCTAGGAACTTCATGGAGCCGAAGCCTCAAAAGACCCTCGGCAGGCCAATAGAAAAGTTTCAGACTGAAGTTTTGCCTCCAAAATCGGCCAAATCAATTCCAGTTACACAGCATAAACTTTTGTCCCCTATTAAGAGCCGTGGCTTTGTTTCAACCAACAATGCTGCTTATATAATGGAGGCTGCAGCAAGAATCATTGAACCTGCACCCCGTGCTGTGGCTGCAAAGGCTAAGACACCTTTGATAGCTCCATCCACGGTATCATTGAAGGTCAGAGATCTTAAAGAGAAAGTGGAGGCTTCACAAAAGGCACCTCTAACTGGGTCATCTTCCATGACCTTTAGAGCTCgagatataaaagaaaagagagagctTTCTCATAAAACAACGAGGCTTTCTGAACCCTCTCAAAAGTCAGTCGAGTCAAATGCTACCAGGTATCTCAAGGGACAATCTCTGAACAAAAGCTGGAACGGATCTGTGGAAACATCCATTAGGTCTCCTATTTATGCAGAAGAAGACTCTTCTTTATGGAACAAAGGGAAGTCTATTTCACTTGCAATCCAAGCAAAAGAGAATGTGCAAAGAAGGGAAGGTTTGAGCACAAACAGTGGGAGAAGTTTTTCTGGCCAGAAAGAACATCTTGAGGTTAAACCTAACCAGCCAAGGAAGACAAATGTTCAAAAGAATTTGCATAAGAGACCTTCAGGTCAGAATTCTTCTGGTGTTCTTAGGCAGAATAATCAGAAACAGAATCGTTCAGTTGATAAGGACAAATTACCATCGAAGTCTTTGGCCAACAATTCACATGGTAGAAAAGTTCTGTCTGGAGATTCCTCTTATGGACGTCATAGAAGCTCTAGCAGTAAATCTACTGGAAAATCTAAAGTTGGATCCAGGAAGTTAGGCTTGGAGGTGACAGATGGTGAGAAAGAAGATCTATATACCAGTACAAACAATTACCCTAGAAAGAAACGATCAACAGGGAGGGACTGGAATGATCGGGTTGTTGATAATTTGTTCATTGATAAAACTAAGAAGCATGTTCAGTCTAATGTAGTTAGTAACAACCACTTAAGTGGGGCTGaagaagttaaaaagaaagacatgGATGTAGTTTCCTTCACATTTACTACTCCACTGACAAGAACCAGTTCTGGTTTTGAGACATCTGGACAGGCTGGCCCCAAAACTAATGGTCTTTCCCTTGATCACCGCATTAAGAGAGTGTTGCTTGACTCAGACAGTACAAAGTCCCCGGTAGGATACAATGTGATAGGTGGTGATGCTTTAGGTATCCTTTTGGAACAGAAGCTGAGGGAATTAACATTTGGAATTGAGAGTTCTTGTCAAGACGCTTTTAAAGTAAGGCCACCTTCCAGCATTGCATCAAGTTCAAATGATTCGGGACTCTCCCTTAATACGGTTAATATCATGCCGAGATATCAacagaagaaggaccaaaatgtgCTATTTACAGAAAAGATGGGCATCAGACATGATCGATTGGACATCTCCTCCACTGATCTCCCTGAATTAACTCTGAAACACAAGTCGTGGGTTCTTGATGAGATGGAAGGGTGTACAAGCCGTCATACAGAATCACGATTATTCAATTGCCGGCATCCAAGTCCAACCTCCATTCTTGAACCTTCCTTTTCGACTGAAAGCTGTGAATCTTCAGTCAGCACAGATGCTACGGATAGTACAGAAGGAAGCAAGTTATGCTCATCCGCTCAAGTTCAGGAAGTTCTTGGTTTGAGTTCTTCGGGGAAGTTCTATCCTGCAGAAGCTGATACAGAGTTGTCAGATTCAGCTTCTTCAACAACAAGTGGGTACATGGTAAAGAAGCACGCAAACACGTGTTCtgtcatgaagtttggaagatCAAGTACATGGGAGTTGGACTATGTGAAAGCTATATTGTGTAATGTGGAATTGATGTTCGTTGACTTTGCCCTGGGTCGAGCACAGATTGTGAATCCTCATCTGTTCAATCAGTTGGAAAGTCAAAAAGGAGGGTTTGGTAGTGACGGGGGTGAGTCCAAGATAAGAAGGAGAGTTATATTTGATTGCGTCAGTGAATGTTTGGACTTAAGATGCGGGCGTTATGTTGGTGGGGGATACCAAATGTGGGCCAAAGGGATCACAATGGTGAGAAGGAACGAATTCTTAGCAGAAGAAGTTTACAAAGAGATCTCAGGATGGGGAGGCATGGGAGATTCAATGGTAGATGAGCTCGTAGACAAGGACATGAGCAGCCAATATGGAAGATGGCTAGATTTTGACGTTGATGCTTTCGAACTTGGTGCAGAAATTGAGGATCAGATATTAAATTCTTTGGTTGACGATGTTGTTGCTGATATTTTGCAAATATG 2849 0.4075 MGVEKEGTKSGGGYVGGFLQLFDWSSKSRKKLFANKSDLPESSKQGRKVNGNLAMTRPYVVDEDEIGLGSSVRGSSDHSYASSVTDDEVCGARVPSVVARLMGLDSLPTSNFLDPYSTPYFDTRSLQDSQYSRRNLNYQHDHQSVYSGNLLEKVEGSSRNFMEPKPQKTLGRPIEKFQTEVLPPKSAKSIPVTQHKLLSPIKSRGFVSTNNAAYIMEAAARIIEPAPRAVAAKAKTPLIAPSTVSLKVRDLKEKVEASQKAPLTGSSSMTFRARDIKEKRELSHKTTRLSEPSQKSVESNATRYLKGQSLNKSWNGSVETSIRSPIYAEEDSSLWNKGKSISLAIQAKENVQRREGLSTNSGRSFSGQKEHLEVKPNQPRKTNVQKNLHKRPSGQNSSGVLRQNNQKQNRSVDKDKLPSKSLANNSHGRKVLSGDSSYGRHRSSSSKSTGKSKVGSRKLGLEVTDGEKEDLYTSTNNYPRKKRSTGRDWNDRVVDNLFIDKTKKHVQSNVVSNNHLSGAEEVKKKDMDVVSFTFTTPLTRTSSGFETSGQAGPKTNGLSLDHRIKRVLLDSDSTKSPVGYNVIGGDALGILLEQKLRELTFGIESSCQDAFKVRPPSSIASSSNDSGLSLNTVNIMPRYQQKKDQNVLFTEKMGIRHDRLDISSTDLPELTLKHKSWVLDEMEGCTSRHTESRLFNCRHPSPTSILEPSFSTESCESSVSTDATDSTEGSKLCSSAQVQEVLGLSSSGKFYPAEADTELSDSASSTTSGYMVKKHANTCSVMKFGRSSTWELDYVKAILCNVELMFVDFALGRAQIVNPHLFNQLESQKGGFGSDGGESKIRRRVIFDCVSECLDLRCGRYVGGGYQMWAKGITMVRRNEFLAEEVYKEISGWGGMGDSMVDELVDKDMSSQYGRWLDFDVDAFELGAEIEDQILNSLVDDVVADILQI 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00271 949 PANTHER EXPRESSED PROTEIN 259 947 - -
Bva06g00271 949 PANTHER EXPRESSED PROTEIN 1 260 - -
Bva06g00271 949 MobiDBLite consensus disorder prediction 257 301 - -
Bva06g00271 949 Pfam Domain of unknown function (DUF4378) 791 941 IPR025486 -
Bva06g00271 949 MobiDBLite consensus disorder prediction 350 485 - -
Bva06g00271 949 MobiDBLite consensus disorder prediction 272 288 - -
Bva06g00271 949 MobiDBLite consensus disorder prediction 350 367 - -
Bva06g00271 949 MobiDBLite consensus disorder prediction 378 407 - -
Bva06g00271 949 Pfam DUF761-associated sequence motif 82 112 IPR032795 -
Bva06g00271 949 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 259 947 - -
Bva06g00271 949 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 260 - -
Bva06g00271 949 MobiDBLite consensus disorder prediction 418 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00271 Bva-Chr6 4297854 4302651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00271 16 947 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 32.384 2.70e-99 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00271 - - gmx:102669513 1275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01309 05 6876191 6881044 Bva06g00271 06 4297854 4302651 BWGD