Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00269 ATGTCAGAAGGAACAAGTATGGTCCTGGAATCATCGGAAAATGGCACAGATTTATCTCAGGATGACATTGGCACCATTGAGGAGACACCAGAAGAGACAATTTTGTCACGACAAACTTCTGTGAACCTAGTTCCGTTCATTGGTCAAAGATTTATTTCTCAGGAAGCtgcttatgaattttattgcaGTTTTGCAAAACAATGTGGTTTTTCTATTAGACGGCACCGCACTCGAGGCAAAGATGGGATTGGCCGGGGAGTTACAAGAAGGGATTTTACTTGCCATCGTGGTGGATATCCCCAAATTAAGCCATCTGATGATGGAAAAATGCAAAGGAATCGCAAATCTTCACGCTGTGGCTGTCAAGCATACATGCGTATTGTCAAAAGGGCAGATTTTGATGTCCCTGAATGGCGTGTTACTGGCTTTAGCAATGTCCACAATCATGAGTTGTTAAAATCCAATGAGGTTCGTCTTCTTCCAGCGTACTGTACAATATCTCCAGATGACAAGAGTCGTATATGTATGTTTGCTAAAGCTGGAATGTCAGTGAGGCAAATGCTGAGGTTAATGGAGCTAGAGAAAGGCATAAAACTTGGTTGTTTACCTTTTACTGAGATAGATGTGAGAAACTTGTTGCAGTCTTTCAGAAATGTTGATAGAGATAATGATGCTATTGATCTTATTGCTATGTGCAAGAgattgaaagatgaaaatcaaaacttcAAGTATGAATTCAAGATAGACAGCAATAACAGGCTAGAGCATATTGCATGGTCCTATGTCTCATCTATTCAATCATATGAAGCATTTGGAGATGCCGTGGTTTTTGATACAACCCACCGTCTGGATGCCTATGACATGCTGTTAGGAATTTGGCTTGGAGTGGACAATCATGGAATGACTTGTTTCTTTGGTTGTGCACTACTTCGTGATGAGAATATGCAGTCATTTTCATGGGCCCTAAAGgCATTCTTGGGCTTCATGAAGGGAAAGGCTCCACAAACAATATTGACCGATCATAACATGTGGCTGAAAGAAGCAATTGCTGTTGAAATGCCTGACACCAAACATGCCTTTTGCATATGGCATATTATTGCAAAGTTCTCTGACTGGTTTTCTGTACTTCTTGGATCACATTATGATGAGTGGAAAGCTGAGTTCCATCGGCTTTACAATTTGGAACTTGTGGAAGAGTTTGAAGAAGGCTGGAGACAGATGGTTGCTAAATATGGACTCCATACAAATAAGCATATAGCCAGCTTATATTCGTTAAGGACATTTTGGGCTCTACCATTCCTGAGGCGTTATTTCTTTGCAGGATTGACTAGCACATGTCAGTCTGAGTCCATTAATGCTTTCATCCAACGTTTCTTGAGTGCCCAATCTCAACTGGATCGCTTTGTAGAGCAAGTGGCTGATATTGCTGATTTTAATGACCGGACTGGAGCCAAGCAAAAGATGCAACGAAAACCGCAGAAAGTGTGCCTTAAAACCGGTTCACCAATTGAATCCCATGCTGCCACTGTGCTCACTCCGTATGTTTTTAGTAAACTCCAGGATGAGCTAGTTCTGGCACCACAATATGCATCTTTTCTGGTAGATGAGGGTTGTTTCCAGGTCAGACACCATACTCAGATGGATGGAGGATGCAAAGTATTTTGGGTTCCTTGTCAAGAGCACATAAGCTGCAGCTGCCATTTGTTTGAGTTTTCTGGTATCTTATGCAGACATATTCTCCGTGTCATGTCAACTAATAACTGTTTTCACATCCCTGACCAATATCTACCTGTCCGTTGGCGTGGTATGAGTTCATCTTCAGCCAACCTCTTCAGGGGTATAACTACCAGAGATAATCCTGAAAAGATACAACTTTTAGAGTCCATGGTTTCAACACTTGTAATGGAATCTATTGAATCAGAGGAGCGTCTTGATGTTGCTTGTGATCAAATTTCCATGGTGTTATCACGGATTAAAAGCCTTTCTAGGCCATCACATGGAGTGAATGACATTGCATATAATTATCCATCAGATTCGTTGATTCTACCAGAGGTGGAAGATGCTGATGGGATAATTAATGGTTTTGCAATTACAAATCCCCATGATTCCATCACTTTAGGGAAGCTGAAGGAGAGAAGGGCAAGAGATGGAGTTGATATTACTAGGAAGCGCAGACATTTTTCAGGGCCGTTATGTGGACAATACGGGCATGATGCATCTGATTGCTCACTAATGGCTGGCGATACTTTGAATGGAGATACACTAGGATACTTGTA 2276 0.4086 MSEGTSMVLESSENGTDLSQDDIGTIEETPEETILSRQTSVNLVPFIGQRFISQEAAYEFYCSFAKQCGFSIRRHRTRGKDGIGRGVTRRDFTCHRGGYPQIKPSDDGKMQRNRKSSRCGCQAYMRIVKRADFDVPEWRVTGFSNVHNHELLKSNEVRLLPAYCTISPDDKSRICMFAKAGMSVRQMLRLMELEKGIKLGCLPFTEIDVRNLLQSFRNVDRDNDAIDLIAMCKRLKDENQNFKYEFKIDSNNRLEHIAWSYVSSIQSYEAFGDAVVFDTTHRLDAYDMLLGIWLGVDNHGMTCFFGCALLRDENMQSFSWALKAFLGFMKGKAPQTILTDHNMWLKEAIAVEMPDTKHAFCIWHIIAKFSDWFSVLLGSHYDEWKAEFHRLYNLELVEEFEEGWRQMVAKYGLHTNKHIASLYSLRTFWALPFLRRYFFAGLTSTCQSESINAFIQRFLSAQSQLDRFVEQVADIADFNDRTGAKQKMQRKPQKVCLKTGSPIESHAATVLTPYVFSKLQDELVLAPQYASFLVDEGCFQVRHHTQMDGGCKVFWVPCQEHISCSCHLFEFSGILCRHILRVMSTNNCFHIPDQYLPVRWRGMSSSSANLFRGITTRDNPEKIQLLESMVSTLVMESIESEERLDVACDQISMVLSRIKSLSRPSHGVNDIAYNYPSDSLILPEVEDADGIINGFAITNPHDSITLGKLKERRARDGVDITRKRRHFSGPLCGQYGHDASDCSLMAGDTLNGDTLGYL 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00269 758 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 8 738 - -
Bva06g00269 758 Pfam FAR1 DNA-binding domain 59 152 IPR004330 -
Bva06g00269 758 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 738 IPR031052 GO:0006355
Bva06g00269 758 ProSiteProfiles Zinc finger SWIM-type profile. 554 587 IPR007527 GO:0008270
Bva06g00269 758 Pfam SWIM zinc finger 559 584 IPR007527 GO:0008270
Bva06g00269 758 SMART 26again6 562 589 IPR006564 GO:0008270
Bva06g00269 758 Pfam MULE transposase domain 275 367 IPR018289 -
Bva06g00269 758 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00269 Bva-Chr6 4285292 4289584 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva06g00269 MULE 8.1e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00269 - - gmx:100778434 1402.5