Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00264 ATGGTGGATCCGACTGGAAAAAAATCAGAAGCTGACGATGCTAACAACAGGAATCCAAGCGAGGCTTCATCAGAGGAGAGCCCAATGAACGAGCAGAAGAAGACATGCGCCGATTGCGGCACAACCAAAACCCCTCTTTGGAGGGGTGGTCCTGCCGGGCCTAAGTCACTGTGCAACGCTTGCGGGATCAGAagcaggaagaagaagagagcgATTCTGGGCATCAACAAGGGAAGCGCAGAAGAcaacaaaaagggaaagagaagcACTAATGGCGGTAGTAGCAATAAGCTCGGAGATAGTTtgaagcaaagattaatgGCTTTGGGGAGAGAGGTTTTGATGCAGAGATCAACCATCGAAAGGCCAAGGAAGAGGCTAGGAGAGGAAGAACAAGCAGCTGTATTGTTGATGTCTCTTTCCTATGGCTCCGTTTATGCTTA 443 0.4334 MVDPTGKKSEADDANNRNPSEASSEESPMNEQKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKKRAILGINKGSAEDNKKGKRSTNGGSSNKLGDSLKQRLMALGREVLMQRSTIERPRKRLGEEEQAAVLLMSLSYGSVYA 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00264 147 Pfam GATA zinc finger 36 70 IPR000679 GO:0006355|GO:0043565
Bva06g00264 147 ProSiteProfiles GATA-type zinc finger domain profile. 30 66 IPR000679 GO:0006355|GO:0043565
Bva06g00264 147 CDD ZnF_GATA 35 70 IPR000679 GO:0006355|GO:0043565
Bva06g00264 147 PANTHER OS01G0976800 PROTEIN 3 147 - -
Bva06g00264 147 MobiDBLite consensus disorder prediction 1 15 - -
Bva06g00264 147 Gene3D - 30 97 IPR013088 GO:0006355|GO:0008270
Bva06g00264 147 ProSitePatterns GATA-type zinc finger domain. 36 61 IPR000679 GO:0006355|GO:0043565
Bva06g00264 147 SMART GATA_3 30 87 IPR000679 GO:0006355|GO:0043565
Bva06g00264 147 MobiDBLite consensus disorder prediction 1 59 - -
Bva06g00264 147 PANTHER OS01G0976800 PROTEIN 3 147 - -
Bva06g00264 147 MobiDBLite consensus disorder prediction 72 102 - -
Bva06g00264 147 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 31 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00264 Bva-Chr6 4267337 4268631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00264 1 147 C2C2-Gata Transcription Factor Family AT5G49300 58.503 7.23e-54 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bva06g00264 GATA 6.7e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00264 - - zju:107433211 226.483