Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00189 atgaagatgaatggAAATCAGCTACTGCTACATGGTATGGAGATCCAAATGGTGGCGGATCAGATGGTGAAATGCACAGAAAATACTGCATGCTCAGGTAACCCAGTTACCGTGGTTACAACTGATTCAGGCCCAGCTGGGGCAAAATCTGAGTGGTACTGCATTGGTGCCATGGCAAAATCTGACCAAGCTGATAATCTTCGCAACGTTGGACGCCTTCAAGTTCAATACACAAGGGTTGCATGCAATTTTGATGTAACTATAGCCTTTAAAGTGGATGTTGGGTCCACCCTTCCTATTTCGTTATGGcaattgaatatgaaaatggGCGTAGCGACCTG 341 0.4194 MKMNGNQLLLHGMEIQMVADQMVKCTENTACSGNPVTVVTTDSGPAGAKSEWYCIGAMAKSDQADNLRNVGRLQVQYTRVACNFDVTIAFKVDVGSTLPISLWQLNMKMGVAT 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00189 113 PANTHER EXPANSIN-B3 22 96 - -
Bva06g00189 113 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 23 87 IPR007112 -
Bva06g00189 113 SUPERFAMILY Barwin-like endoglucanases 23 84 IPR036908 -
Bva06g00189 113 PANTHER EXPANSIN-B2-RELATED 22 96 - -
Bva06g00189 113 Gene3D - 15 83 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00189 Bva-Chr6 3448223 3449628 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00189 23 96 Expansin Gene Family AT1G65680 49.383 4.93e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00189 - - oeu:111383091 85.1149