Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00159 ATGGAAGCACAGGCTGTGGTTCGGGGTTTGCTGTTGAAGGAAGAAGATAAATCGTTGACAACAAACCGGTTTGCGACGGATTCGGTGGTGGAAATCCGGGGCTCTGACGGTTTGGCGGGGCTGGAGTGCTTTCTGAACATTGCCAGGGCCCTGGGAATGGGATCATGCTTCTCAGGGGATGGGAGTCCCCGTCCCCTGCCTTGCGGGTCGGAATCCCCTTCGGATGGCGGGAAATGGAGGAAGAGATTGAGgaattcttcttcctttgattACAAGATCGAGTTAAGGCTGCATAGAGTTCCTGGGAGAATGTTCTTAAATGGATCAAGTGAGGTCGCATCCTTGTTTTCTAAGCAAGGCAGAAAAGGGATCAACCAGGATGCCATGCTTGTTTGGGAGaaCTTCTCTTCAAAAGACACCATTTTTTGTGGAGTTTTTGATGGTCATGGACCATACGGCCATAGGGTCGCGAAGAAAGTTAGGGATTCTTTCCCTTTAAAGCTTAGTGCTGAATTGGAATTGCATTACAAGAACAAAAATGGAGCCATTGATGTCGGTGATGTAGATCATGGTGTCTCCGAcagaaatatttcttttatgacaCTGAAAGAGTCATTTCTGAAAGCTGCTAAAGTTATGGACAAAGAATTGAAACTGCATCCTGATATTGATTGCTTTTGCAGTGGAACTACAGCAGTTGCCTTGATCAAACATGACCTTGTTATTGGAAATGTTGGGGACTCGAGAGCCATATTGGGTACCAGGGATCATAGTGGTTCTCTTACTGCTGTACCGCTGACCATTGACCTTAAGCCAAATCTTCCAAAGGAAGCAGAGAGGATCAAGCTTGCTAGAGGTAGAGTCTTCGCACTTCAGAATGAACCCGAGGTTTCTCGAGTTTGGCTGCCTAATGCTAATTCCCCTGGCCTTGCCATGGCACGGGCCTTTGGAGATTTTTGCCTAAAGGACTACGGCCTGATCTCTGTTCCTGATATCTCATATCACCGCATTACTGAAAAAGATGAATTTGTTGTGTTAGCCACAGATGGGATTTGGGATGttttatcaaacaaagaaGTTGTAGACATTGTGGCAGCTTGTACTCGAGCTTCTGCAGCTCGAACACTGGTCGAGACCGCTGTTCAATCTTGGAAGACTAAATATCCTACCTCCAAGGTTGATGATTGTGCTGTAGTTTGCCTCTTCCTCGATGCAGAAGCCGACTTCAAGTCAGCATTGGACAACGATTCACCGCGTGCACCTCTTGATCAATCTGACTTTAGCCCCAGGGGAGCTGCTGCTGATTCTCTTGTCAACTCTTCAAGATTGTCTAGAACTGCCCCAGAGCATTCACCTCTACTCGAAGACGGGAAAGTTGGAGCTTA 1385 0.4563 MEAQAVVRGLLLKEEDKSLTTNRFATDSVVEIRGSDGLAGLECFLNIARALGMGSCFSGDGSPRPLPCGSESPSDGGKWRKRLRNSSSFDYKIELRLHRVPGRMFLNGSSEVASLFSKQGRKGINQDAMLVWENFSSKDTIFCGVFDGHGPYGHRVAKKVRDSFPLKLSAELELHYKNKNGAIDVGDVDHGVSDRNISFMTLKESFLKAAKVMDKELKLHPDIDCFCSGTTAVALIKHDLVIGNVGDSRAILGTRDHSGSLTAVPLTIDLKPNLPKEAERIKLARGRVFALQNEPEVSRVWLPNANSPGLAMARAFGDFCLKDYGLISVPDISYHRITEKDEFVVLATDGIWDVLSNKEVVDIVAACTRASAARTLVETAVQSWKTKYPTSKVDDCAVVCLFLDAEADFKSALDNDSPRAPLDQSDFSPRGAAADSLVNSSRLSRTAPEHSPLLEDGKVGA 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00159 461 CDD PP2Cc 112 403 IPR001932 -
Bva06g00159 461 MobiDBLite consensus disorder prediction 414 461 - -
Bva06g00159 461 Pfam Protein phosphatase 2C 120 381 IPR001932 -
Bva06g00159 461 PANTHER ALPHABET, ISOFORM E-RELATED 53 411 - -
Bva06g00159 461 SUPERFAMILY PP2C-like 110 404 IPR036457 -
Bva06g00159 461 SMART PP2C_4 101 401 IPR001932 -
Bva06g00159 461 ProSiteProfiles PPM-type phosphatase domain profile. 112 403 IPR001932 -
Bva06g00159 461 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 53 411 - -
Bva06g00159 461 Gene3D - 108 405 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00159 Bva-Chr6 3221701 3225843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00159 53 405 PP2C-type Phosphatase Gene Family AT3G02750 54.608 1.61e-142 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00159 - - gmx:100802479 561.992