Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00155 ATGTTCTCCAAAACATATCCATTCCATTtgctcatatttttctttgtgggAATTTCATGGATGAACATATTAGCAGCAGCTTCTTCATCACCAACCAATTTTGCCAAATTCTCAGgggcttcatcttcatcttcatcttcaacaaCCAAACCTTTCATTTTACACAATAATCCAAGTCATGATCAACTCTTTGTTCACTCTCTTCAGTCCACCATTGACAAAGCCAATCATGCTCAAGCCCTTCTCTCTAACCTCACCATTTCCCATAGAAAATCCCATGACACTGAAATTGTTGGTGGCTTCATTGACTGCATGGAGCTGCTAGATGACACTCTTGACCAGCTCCAAAATGTGGCTTCTATAGAGGATATTGGATCACATGCTGTGGTGGCCAAAGATGGGAGTGGGACCCACATGACCATAGGAGAGGCACTCAATGAGCTGAAAGCTTCacttggtggtggtggtgggagAAGGACTGTTATTCACGTAAAGGCAGGAACTTATAATGAGAATATCAAGATACCCACAAAGCAGAAGAACGTTATGTTGGTTGGAGATGGGAAGGGCAAAACTGTCATTGTAGGCAGTAGGAACTCAAAAGATGGCTGGACTGCTTTCCAATCTGCCACTGTTGCTGCAATGGGCGATGGCTTCATAGCAAGGGGCATAACCTTCATCAACAGCGCAGGCCCTACCAAGAACCAAGCCGTTGCCCTTCGTGTTGGCTCAGACAAATCAGTGATCTTCAGATGCTCCATTCTCGGCTACCAAGACACACTCTACACTCACTCAAAACGACAATTCTACAGAGACACTGACATCTACGGCACCATAGACTTCATATTTGGCAACTCTGCTGTCGTTTTGCAGAACTGCAACATATTTCCCAGAAAACCCTTGTCAAACCAGCAAAATTACATCACAGCCCAAGGCAGAATTAACCCTAATCAGAACACTGGCATATCCATCCACAACTGCAAGATCACAGCTGCTTCTGACTTAGCTGCCGTGAAGCGCACGGTAACTACGTATCTAGGGAGGCCATGGAAGCAATATTCAAGAACTGTTATTATGCAGTCGTTTATAGATGACATGGTGCACCCAGCCGGGTGGTCACCATGGTCAGGGAGTTTTGGGCTTGGCACACTCTATTATGGGGAGTATATGAATTCTGGTCCTGGTGCCTCAACCAGGAGAAGGGTAAAATGGTCAAGTTACCATCCCTCTCTTGCCTCCATTGAAGCTCAAAAGTTTACTGTTGGTGGATTTATTGATGGGAATCTTTGGCTACCCTTTACAGGGGTATCTTTTGATTCTGGTTTACTTGGCTA 1334 0.4243 MFSKTYPFHLLIFFFVGISWMNILAAASSSPTNFAKFSGASSSSSSSTTKPFILHNNPSHDQLFVHSLQSTIDKANHAQALLSNLTISHRKSHDTEIVGGFIDCMELLDDTLDQLQNVASIEDIGSHAVVAKDGSGTHMTIGEALNELKASLGGGGGRRTVIHVKAGTYNENIKIPTKQKNVMLVGDGKGKTVIVGSRNSKDGWTAFQSATVAAMGDGFIARGITFINSAGPTKNQAVALRVGSDKSVIFRCSILGYQDTLYTHSKRQFYRDTDIYGTIDFIFGNSAVVLQNCNIFPRKPLSNQQNYITAQGRINPNQNTGISIHNCKITAASDLAAVKRTVTTYLGRPWKQYSRTVIMQSFIDDMVHPAGWSPWSGSFGLGTLYYGEYMNSGPGASTRRRVKWSSYHPSLASIEAQKFTVGGFIDGNLWLPFTGVSFDSGLLG 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00155 444 SUPERFAMILY Pectin lyase-like 127 440 IPR011050 -
Bva06g00155 444 PANTHER PECTINESTERASE 125 441 - -
Bva06g00155 444 ProSitePatterns Pectinesterase signature 1. 156 175 IPR018040 -
Bva06g00155 444 ProSitePatterns Pectinesterase signature 2. 275 284 IPR033131 -
Bva06g00155 444 PANTHER PECTINESTERASE 21 119 - -
Bva06g00155 444 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 35-RELATED 125 441 - -
Bva06g00155 444 Pfam Pectinesterase 128 428 IPR000070 GO:0030599|GO:0042545
Bva06g00155 444 Gene3D - 121 442 IPR012334 -
Bva06g00155 444 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 35-RELATED 21 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00155 Bva-Chr6 3142715 3146145 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00155 119 443 Carbohydrate Esterase AT3G59010 69.846 7.95e-164 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00155 - - qsu:111994188 511.916