Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00147 ATGGATTCTCCAGCATTCCAAAAACCATTTCAAAAACCAAGATCTGTAATGACAAGATTTCTTGTCAAATCTCAACAAGTAGGCGATGGAACAGATCTTAGGGAAAGcGAGTTGAGTTCTTTGGATCCTTTTCTgatgttatttcatttctcaGTAACAAAACCAGGTGGATTTTCTGATCATCCACATAGAGgTTGTGAGACTGTCACCTATGTGATAAAGGGTTCCATAATGTGTGAAGATTTTACTGGACATCGATGTGTGATAAGAACTGGTGATGTTCAGTGGATGACTGCTGGAAAAGGAATCATTCATGCTGAAATGCCAGAAGGAGAAGGAACCCATACTGCAATACAGATATGGATCAATTTACCCCATAAGgataaaatGATTGAGCCACAGCACAAAGATGTTTCAAGTAATATCATTCCATGTGCACAGAAAGATGGGGTTGAGGTTAGGGTTTTGGCTGGAGAAGCCATGGGAGTGTCTTCACCAGTTTACACAAAAACTCCAACCATGTTCCTCGATTTCACAATGAATCCGGGAGCTCGGCTGCATCAAAAGATTCCGGATTCTTGCAATTCCTTTGTTTATGTGATTGAAGGGGAAGGAATCTTTGGTTCCCTCGTTTCTTCGCCGGTGACAGCACACCATGTTCTGGTGTTGGATCATGGAGATGGTCTGAATGCATGGAACAAGTCTCTGAATCCATTGAGGTTTCTGCTATTGGGAGGGCAACCACTTAACGAGCCAGTGAAACAGTACAGAACTTTTGTGATGTGCTCACAATCTGAGATTGATAAAACTGTTGAGGACTTTAGCCAATTCAAGAATGGGTTTGAGAAGGGAAAAGATTGGAGATCACAGTA 872 0.4071 MDSPAFQKPFQKPRSVMTRFLVKSQQVGDGTDLRESELSSLDPFLMLFHFSVTKPGGFSDHPHRGCETVTYVIKGSIMCEDFTGHRCVIRTGDVQWMTAGKGIIHAEMPEGEGTHTAIQIWINLPHKDKMIEPQHKDVSSNIIPCAQKDGVEVRVLAGEAMGVSSPVYTKTPTMFLDFTMNPGARLHQKIPDSCNSFVYVIEGEGIFGSLVSSPVTAHHVLVLDHGDGLNAWNKSLNPLRFLLLGGQPLNEPVKQYRTFVMCSQSEIDKTVEDFSQFKNGFEKGKDWRSQ 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00147 290 SUPERFAMILY RmlC-like cupins 37 288 IPR011051 -
Bva06g00147 290 Pfam Pirin C-terminal cupin domain 175 279 IPR008778 -
Bva06g00147 290 Pfam Pirin 35 122 IPR003829 -
Bva06g00147 290 PANTHER PIRIN-LIKE PROTEIN 7 290 - -
Bva06g00147 290 Gene3D Jelly Rolls 144 249 IPR014710 -
Bva06g00147 290 PIRSF Pirin 12 288 IPR012093 -
Bva06g00147 290 CDD cupin_pirin_C 172 248 - -
Bva06g00147 290 PANTHER PIRIN-RELATED 7 290 IPR012093 -
Bva06g00147 290 Gene3D Jelly Rolls 35 275 IPR014710 -
Bva06g00147 290 CDD cupin_pirin_N 37 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00147 Bva-Chr6 3047079 3050490 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00147 13 285 Calmodulin-binding Proteins AT3G59220 51.971 1.80e-102 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00147 K06911 - mnt:21404588 377.867