Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00131 ATggaaaaaattgtcatttccATTGCTGCAAAAATCGTAGAGTACACTGTGGCACCCATTGGACAGCAGGTAGGTTATTTGTTATCCTACAAAAGCCATTTCAAGaatttaattgatcaaattgaGGCACTtggggaaaaaagagaaagcatcaaagaaattatagaAGCTGagagaagaaatggaaaattaatCCAAGATGATGTACAGAATTGGGTTAACGGAGTTGATGAGATTATTGAAGCTGTAATGAAGCTCTTTGAAGATCCACGCCTAAGGAATGTAAGCTTCTCCCACTGGTCATTTCCAAATTTGTGGTGGAGACATCAACTGAGTAGAAAAGCCAACAAGATGGCGAAATGTTTTGctcattttcaagaaaaagggAAGTTTGAAAGAGTTGGATACCTCCCTGCTCTAGATGGAGTAAGTCACATTACAGAAACAAGAGGTATTCAAAACTTCGAGTCTCGCATTTCAATTATCAAGGATATTAGGATGGCTTTAACTGACCCTAAACTAAACAAGATTGGGGTCTATGGGCTTGGTGGTGTAGGTAAGACAACTCTAGTTAAGCAAGTTGCAGCAGCAGCTAAGGtggaaaaattgtttgatgaaGCGGTTATGGCATTTGTAACACAAACTCCGAACATCAAAAGAATTCAAGGTGAAATTGCAGATTTAttgggtttaaaatttaatgaggaAACAGTGGTTGGTAGAGCTTTTCGCCTTcgtgaaagaataaaaagggaGAAGAGTATCCTTATAATACTAGATGATATCTGGGCAAGACTTGATTTGGAGGAAATTGGAATTCCTTTTGAAAATGATCATAAGGGTTGTAAAGTAGTAATGACATCCAGAACACAGGATGTATTACAGCTGATGGATACTCAAAATGATTTTAGGGTTGAAGTTTTGAGTGAAGAAGAAGCATGGAACTTGTTTAAAGTCATGGCCGGTTTAGATAATGACGCCAGTCTACAAAACATAGCAACTGAGGTGGCAAAAAAATGTGCAAATTTGCCTGTTCTAATAGTCACAATGGCAAGGGCATTGAGAAATAAGGAGATTCATGAGTGGAAAGATGCCTTGATTCAACTAAAAGACATTGACCATAAAGAAATGCACGAGGTCACTTATTCAGCTTTGGAGTTGAGTTACAACCGGTTGGAAAGCAATGAAATAAAGGCATTATTCTTGATCTGTGGGATGCATGGAGGATTTATTAATACAAGGGACTTGTTAAAGTATGGGCTTGGTTTGGGAATATTTCAAAAGGTAAATAATACTTTGGAGGATGCAAGAAACAGACTTTCCAAAATGATAGGTGCTCTTAAGACATCTTGTTTGTTGCTTGAAGACAACACAAATGAATATGTTAAAATGCATGATATTGTTCGTGATGTAGCCATTTCAATTGCATTTAAGGAACAACATGTTTTCACTGTAAATAGTATGGAGTTGAAAGAGTGGCCACCAGAGGATTTTCTTAAAGGGTGCTCTCAAATCATCTTGGATAGGTGTCATATCCATAAGTTTCCTCAAAGGTTAGATTGTCCTAAGCTTAAGcttttttacttgaattgTGCTCATAATCGCTCTTTAGAAATACCAAATTCCTTTTTTGAACAAATGAGAGGCCTGAAGGTGTTAGATTTAACAAACATAAACATGCATTCATTACCTTCATCCTTGTGTTTACTAACCAATCTTCAAGTGTTATGTTTGGATCTCTGTACTTTGGGGGATATCTCTGCAATGGAAGCCTTGAAGAATTTAGAAATTCTCAGCCTTTATAAATCATCGATGACAGAATTACCAAGTAATTTAGGACAGTTGACAAAGCTGAGAATGCTGGATTTGGGTAGTTCTGGAATTGACATATTTGCTCCAAAGATCATATCATCCTTGACCAAATTGGAGGAGTTGTATATGGGCAATAGCTCCATCAAATGGGAAGCTGAAAACTCATCAGccatgcaaaacaaaaattctagCCTTGCTGAACTCAGTCAGTTGCATCACTTGAATGTTCTAGATATACAAATACGAGAATCTCAAATTTTTCCAAGGGACATTCATAAATTGTTTGGTAAGTTagaaatatatcaaatatttattgggGATGCATGGGAATGGTCTGGTGAAAACAAAACCTCGAAAACATTGAAACTCAGGCTTCCAACAAGTGTTCATTTGGAGCAAGGAATTAAAGCATTGCTTAGAAGAGTGGAGAATTTGCACCTAGATGAGATACATGGAATTTCAAATGTGCTTTACCGATTGAATGAAGAAGGATTTCCAAATCTGAAGTATCTGCATGTCCAAAATAATGCTAAAATTAAGCATATCATCAACTCAAAGGAATGTGTTCAGTCTCAGGTTTCTTTTCCTGCCTTGGAAAATATAGTGCTTCAGAATCTCAGCAAGTTGGAGACATTATGTCATGGACTGCTAACAGCTAATTCCTTCTGCAAGCTCAAAATCCTCAAAGTCAAAAGCTGTGaccatttaaaatatatattctcctTTTCAATGGTTAAAGGACTTCACAAACTTCTTGAGATTGATGTTTCTGAATGCAATTCTTTGGAGGAAATTGTGTTTGTGGAAAGTGGCATAAACATGGACAAGAGCGAGCTTAAGCTATTGCGTTCTTTGAGTTTACAATGTCTTCCAGCAGTTGAATATTTCCACTCTAAAGGGATCGAATATTCCAAAACAGTGCAAACGCAGATGCAATCAATGAAATATGGTCCTGTGCCCTTTTTTAGTACAAAGGTGgaTATATTTCCCAATTTGGAGATCTTGAAATTTAGCTCAATCAAtgttaagaaaatatgggaGGATGGTCAACTTTCAACCTCTTGcttcattcaaaatttgactAGCCTTATTATAGAGGACTGTGGCAGCCTAAAGTGCTTATTCTCATCATCCATGGTTGGCGTTCTTCTAAAACTCAAACGCCtcgaaataagaaaatgcCATATGATGGAGGAGATTATAGCTAAAGACGAAAGGAGAAACAATGTTATATCCACAGAAGTAagaGTTGGATTCCCCAAACTGGAAACAGTTATACTAAACGATATGCAAAACCTGGAAACGATATGGCACCCTCAGTGTACTGTAAATTCTTTTGGCAGATTGAAGAGTGTAGAAGTGAAGAACTGCGAGAAGATTGTgaatatttttccttcttgtaCGCAAGGAAAATATTCTAGTCTAGAGACACTGACAATAAGTGATTGTGGATCACTGGAAGAGATATTCAGTTTAAATGGCAATGAAACAAGcagtgatgatgaagaagctaCAGCACAACTGAAAAATATGACTCTACTTCAGCTGCCAAAGCTGAAACATATCTGGAGTAAGGATCCTCAAGGAATCCTTGGCTTTCATAATCTACAAGCTGTGCATGTTAAATTCTGTCAAAACTTGGAATACGTATTTCCTCTCTTTATGGCTACAAGACTTCAAAAACTAGAGGAACTTCACATGCATCGCTGTGGGGTGAAAGATATTGTTGCAAACAAAGAAGAACCAGGAGAAGAAACTGcaatttttgtgtttaaacGATTGAGTACCTTGTCACTTTGGAATTTGTGTAAccttgagaaattttattgtgGCAAATACAGTTTGGTATGTCCTTCCTTGAGAGAAATAGATGTGTACAATTGCAACAAGTTGAAGTTATTCAGAACCGAGGACTTGAGCTGCCGAGAAATACCTCATGAACCTATGGAACAAGCTCTTTTCACAGTTGAAGAGGTAATTCCTAAATTGAAGGTTCTGCTATTAAACCACAAGGATACCAACATGATATTACAAGGCCAAGTTTCTCGTGAACTCTTTACCAACTTGAATATTCTCAAGGTATCAGAATTTGAGCATGATGAAGCTTCTTTTCCATATTGGCTTCTCCAAAATATGCCCAACCTCGAACGACTTGTTGTTGTACAAAGTTCCTTCAAGGAATTATTTCAAGATGAAAAGTCTGCGTATGATGAAGGACAAAATGAAATTGCCACACGTCTCAAACAGTTGACCTTGTGTAGATTACCTGAACTTGAACACATATCAAAAGAAGGATCTGGAATTGACCCAGTTCTTGAGATTCTTGAAATATTGTTTGTCTTGAGTTGTTCTAgtcttaaaaaattgttgcCTTCCTCTGTAACTTTTAGTCATCTGACTGAATTGTACGTAGAAAATTGCAATGGAATGGTAAACCTAATTTCCTCCCAGACAGCAAGAGATCTAGTgaagttaagaaaaatgaagataaaagagTGCAGTTTACTTGAAGTGATTGTgacagaaaaagaagacaaagtgaaagatgagattgaatttaacgctttaaaaattttggagcTCGTGAATCTTCCAAGACTCAATAGGTTTAGCTCGAGCAGTCACCTCCACAGGTTCCCATTATTGGAAAAGGTAGTTATGAGGCAATGCCCTCATATGAAGACTTTTTCTGAGGGAGCCACATCTACACCAAAGCTTCGAAAAGTTAGAGTAGCAGAGGAAGATTATGAATGGTGCTTGGAGGGCAACCTCAATGCAACAATCACAAACATGTTCCCAGCACTACATGTAGGAGCTGCTCCATTGGCTCAAAGTTTGTCATCAGCACCTGCACTCTTGAGGAACAGGATGGAGATCTATTCACAGAAGAATGCTCATTA 4712 0.343 MEKIVISIAAKIVEYTVAPIGQQVGYLLSYKSHFKNLIDQIEALGEKRESIKEIIEAERRNGKLIQDDVQNWVNGVDEIIEAVMKLFEDPRLRNVSFSHWSFPNLWWRHQLSRKANKMAKCFAHFQEKGKFERVGYLPALDGVSHITETRGIQNFESRISIIKDIRMALTDPKLNKIGVYGLGGVGKTTLVKQVAAAAKVEKLFDEAVMAFVTQTPNIKRIQGEIADLLGLKFNEETVVGRAFRLRERIKREKSILIILDDIWARLDLEEIGIPFENDHKGCKVVMTSRTQDVLQLMDTQNDFRVEVLSEEEAWNLFKVMAGLDNDASLQNIATEVAKKCANLPVLIVTMARALRNKEIHEWKDALIQLKDIDHKEMHEVTYSALELSYNRLESNEIKALFLICGMHGGFINTRDLLKYGLGLGIFQKVNNTLEDARNRLSKMIGALKTSCLLLEDNTNEYVKMHDIVRDVAISIAFKEQHVFTVNSMELKEWPPEDFLKGCSQIILDRCHIHKFPQRLDCPKLKLFYLNCAHNRSLEIPNSFFEQMRGLKVLDLTNINMHSLPSSLCLLTNLQVLCLDLCTLGDISAMEALKNLEILSLYKSSMTELPSNLGQLTKLRMLDLGSSGIDIFAPKIISSLTKLEELYMGNSSIKWEAENSSAMQNKNSSLAELSQLHHLNVLDIQIRESQIFPRDIHKLFGKLEIYQIFIGDAWEWSGENKTSKTLKLRLPTSVHLEQGIKALLRRVENLHLDEIHGISNVLYRLNEEGFPNLKYLHVQNNAKIKHIINSKECVQSQVSFPALENIVLQNLSKLETLCHGLLTANSFCKLKILKVKSCDHLKYIFSFSMVKGLHKLLEIDVSECNSLEEIVFVESGINMDKSELKLLRSLSLQCLPAVEYFHSKGIEYSKTVQTQMQSMKYGPVPFFSTKVDIFPNLEILKFSSINVKKIWEDGQLSTSCFIQNLTSLIIEDCGSLKCLFSSSMVGVLLKLKRLEIRKCHMMEEIIAKDERRNNVISTEVRVGFPKLETVILNDMQNLETIWHPQCTVNSFGRLKSVEVKNCEKIVNIFPSCTQGKYSSLETLTISDCGSLEEIFSLNGNETSSDDEEATAQLKNMTLLQLPKLKHIWSKDPQGILGFHNLQAVHVKFCQNLEYVFPLFMATRLQKLEELHMHRCGVKDIVANKEEPGEETAIFVFKRLSTLSLWNLCNLEKFYCGKYSLVCPSLREIDVYNCNKLKLFRTEDLSCREIPHEPMEQALFTVEEVIPKLKVLLLNHKDTNMILQGQVSRELFTNLNILKVSEFEHDEASFPYWLLQNMPNLERLVVVQSSFKELFQDEKSAYDEGQNEIATRLKQLTLCRLPELEHISKEGSGIDPVLEILEILFVLSCSSLKKLLPSSVTFSHLTELYVENCNGMVNLISSQTARDLVKLRKMKIKECSLLEVIVTEKEDKVKDEIEFNALKILELVNLPRLNRFSSSSHLHRFPLLEKVVMRQCPHMKTFSEGATSTPKLRKVRVAEEDYEWCLEGNLNATITNMFPALHVGAAPLAQSLSSAPALLRNRMEIYSQKNAH 1570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00131 1570 Coils Coil 41 61 - -
Bva06g00131 1570 Gene3D Ribonuclease Inhibitor 912 1254 IPR032675 -
Bva06g00131 1570 SMART AAA_5 173 309 IPR003593 -
Bva06g00131 1570 SUPERFAMILY L domain-like 928 1238 - -
Bva06g00131 1570 PANTHER RPP4C3 1386 1531 - -
Bva06g00131 1570 PANTHER RPP4C3 1137 1269 - -
Bva06g00131 1570 Pfam NB-ARC domain 170 390 IPR002182 GO:0043531
Bva06g00131 1570 PANTHER - 1386 1531 - -
Bva06g00131 1570 PANTHER - 1137 1269 - -
Bva06g00131 1570 Gene3D - 308 393 IPR042197 -
Bva06g00131 1570 CDD AAA 158 288 - -
Bva06g00131 1570 Gene3D Ribonuclease Inhibitor 1264 1521 IPR032675 -
Bva06g00131 1570 PRINTS Disease resistance protein signature 249 263 - -
Bva06g00131 1570 PRINTS Disease resistance protein signature 340 354 - -
Bva06g00131 1570 PRINTS Disease resistance protein signature 176 191 - -
Bva06g00131 1570 PRINTS Disease resistance protein signature 850 866 - -
Bva06g00131 1570 Gene3D - 146 307 IPR027417 -
Bva06g00131 1570 PANTHER - 1040 1123 - -
Bva06g00131 1570 PANTHER - 24 1014 - -
Bva06g00131 1570 SUPERFAMILY L domain-like 1266 1514 - -
Bva06g00131 1570 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 404 IPR027417 -
Bva06g00131 1570 SUPERFAMILY L domain-like 463 1003 - -
Bva06g00131 1570 Gene3D Ribonuclease Inhibitor 502 902 IPR032675 -
Bva06g00131 1570 PANTHER RPP4C3 1040 1123 - -
Bva06g00131 1570 PANTHER RPP4C3 24 1014 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00131 Bva-Chr6 2786642 2794022 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00131 177 479 WRKY Transcription Factor Family AT5G45050 25.559 1.20e-10 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00131 - - aip:107625541 1379