Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00102 ATGGACAGCAGGGACTATCATCACCATCGTGGTCTGGTGTCACATGCTTCTCCAGCCCCTTATTTTGTACGCCTGGACAATCAAAGAACTACCAACAACGACTTACATTTGAGAAAGAGGACCAGAATGCGCCGGTGGCTTTGTTGTACTTGTCAGGTCGAAGAGTCTTACCCATCCAATGAAAATGAGCACCTAAAAAGCCCAGGGAACTATGGAGATGGCAATCAAAAAGGAACCAGGTTGTCTACTCCTGTCAAACCTGAAGCACAAAAGACACCACCACCTATTGAAGTGCCAGCATTATCTTTAGATGAACTGAAGGAGAAGACGGACAATTTTGGATCAAAGGCCTTGATTGGTGAAGGATCTTATGGGAGGGTGTATTATGCAACCTTGAACAGTGGAAAAGCTGTTGCTTTGAAAAAGCTTGATGTTTCACAAGAACCAGAGACAAATGTTGAGTTTTTGACCCAGGTTTCCATGGTTTCCAGATTGAAGCATGACAATTTTGTTGAGTTGCATGGTTATTGTGTTGAAGGAAACCTTCGTGTACTTGCGTATGAGTTTGCAACTATGGGCTCTCTTCATGACATATTGCATGGCAGAAAGGGAGTTCAAGGGGCACAACCAGGACCAACTCTTGACTGGATTCAGCGAGTTAAAATTGCAGTTGATGCCGCAAGGGGGTTGGAATATTTGCATGAAAAACTTCAACCGGCTATCATTCACAGAGACATCAGATCAAGCAATATACTTATCTTTGAAGACTACAAAGCAAAAGTAGCTGATTTTAACCTTTCAAATCAGGCCCCTGACATGGCTGCACGCCTTCATTCCACTCGAGTGTTAGGAACTTTTGGTTACCATGCTCCAGAGTATGCAATGACAGGCCAGTTGACTCAAAAAAGTGATGTATACAGTTTTGGCGTTGTTCTTCTTGAGCTGCTTACAGGGAGAAAGCCTGTTGACCATACCATGCCTCGTGGACAGCAAAGTCTTGTTACATGGGCTACCCCAAGATTGAGTGAAGATAAAGTAAAACAATGTGTAGATCCAAAACTGAAGGGAGAATATCCTCCTAAAGGAGTTGCAAAGCTAGCAGCTGTTGCAGCTCTCTGTGTTCAGTACGAAGCTGAGTTTAGGCCAAACATGAGTATAGTTGTTAAAGCGCTTCAACCACTTTTGAAGGCTCCTGCTCCGGCACCAGAAACTTG 1214 0.439 MDSRDYHHHRGLVSHASPAPYFVRLDNQRTTNNDLHLRKRTRMRRWLCCTCQVEESYPSNENEHLKSPGNYGDGNQKGTRLSTPVKPEAQKTPPPIEVPALSLDELKEKTDNFGSKALIGEGSYGRVYYATLNSGKAVALKKLDVSQEPETNVEFLTQVSMVSRLKHDNFVELHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWIQRVKIAVDAARGLEYLHEKLQPAIIHRDIRSSNILIFEDYKAKVADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKAPAPAPET 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00102 404 Pfam Protein tyrosine and serine/threonine kinase 118 391 IPR001245 GO:0004672|GO:0006468
Bva06g00102 404 SUPERFAMILY Protein kinase-like (PK-like) 91 391 IPR011009 -
Bva06g00102 404 ProSiteProfiles Protein kinase domain profile. 113 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00102 404 ProSitePatterns Protein kinases ATP-binding region signature. 119 141 IPR017441 GO:0005524
Bva06g00102 404 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 3 ISOFORM X2 29 403 - -
Bva06g00102 404 Gene3D Transferase(Phosphotransferase) domain 1 191 399 - -
Bva06g00102 404 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 29 403 - -
Bva06g00102 404 MobiDBLite consensus disorder prediction 72 86 - -
Bva06g00102 404 ProSitePatterns Tyrosine protein kinases specific active-site signature. 241 253 IPR008266 GO:0004672|GO:0006468
Bva06g00102 404 MobiDBLite consensus disorder prediction 58 96 - -
Bva06g00102 404 Gene3D Phosphorylase Kinase; domain 1 80 189 - -
Bva06g00102 404 SMART tyrkin_6 113 391 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00102 Bva-Chr6 2406422 2410331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00102 47 392 Receptor kinase-like Gene Family AT4G02010 46.991 8.10e-93 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Bva06g00102 PK_Tyr_Ser-Thr 7.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00102 K13436 - mnt:21407434 679.478