Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00057 ATGCATGGTTTGATAGAGGCAATGGGGCAAGAAATTGTTCGCCGACAATCCATCCATGAACTTGGAAAACGAAGTCGACTATGGAACCATGAGGATATCTACCATGTTTTGAGGCAGAAAACGGGAACTGAAGCAGTCCAATGTATATCCCTCGATATATGCAAGATCAAACAGATTAACTTACATGCTAATACCTTTGAAAAGATGAATAACCTTAGATTGCTTCATTTTCACATGTCCAACCCTGAAGAGCATTCAAAAGTGAGAGTTTCGGGAGGTCTTGAAATTTTTCCTTATAATTTAAGGGTTCTACAATGGGACAGATACCCTTTAAGATCATTACCTTCAAGTTTTTTATCAGAGAATCTTGTTGAACTCGACATGCGTAATAGTCAACTTGAGAAACTTTGGGATGAAGATCAGAAACTACCAAATTTAAGAAGGATTGACCTGCGTGGCTCTAAGCACCTTGGTGTATTGCCAGATCTCTCTCATGCTCCAAATATTGAAGAAATCATTCTCAATGATTGTACAAGTTTGCTTCAAGTTTACTCCTCAAATTCCCTTGTGAAGCTTAACCGTTTATGGTTAGATGGTTGTGCCAAACTAAAGGATGTAAATCTTCCCAGAAATGTTTACAGGAGAAGTTCATGGTTAGTGGCATCTTACAGCTATCTTGATCTTGAGAACTTCTCATTcaataaagtgaaaataaggCTCTCAGTACCTGAGCATAGTAACATCTCCATTTTCAAGTTCCAAGCTGTATCTTTCCCATTCCGAGGGATAACTGAATCTATGGATTCACTAGAGTGTGAAGAGTTAAAATTGTTGGGAGAAAGCTTAACCTCTCTGCTTCCATATCTCAGTGAACTACGTTGGTCATCATCAATTGTGAATCTCAGCAAACTTTTTGAGTTGGATCTTTCCTACTATAACACACATGAAACTGCTTCAGGTAACAGTTCTATATTGAAATTCACAATACTCAAATTGATGAGAGCATCCCCAAGGATCTCGACGACAGCTAAATGTTCGatatacaaaaaagaaatagcagTTAATGAAGTAGTCTCATCATTGGAGGATTTGATTGAGCCTAAAGAGTTAACGCTGCCCTTGGTCTTGGGTGCAGCTGCGCTTGCCTTATGCTCTCAGTCTTCCAGCAACATAGTTGATGGCGCAGCTGCTCTGCTTGCGGCTCTGTGGGTGAGCTGCGCTCCTTCTCCAGAAGTGGTTGGCAGTAGCTTTGACACTTGTGCAGCTGCCCTTGCATTCCAGCTTCTAACTTCAAGCTTTCCCATTCTATTTTCCATCTCAGCTTGCCTCCAAATGCTCCAAAAGCTAGGATTTTGTTG 1358 0.3969 MHGLIEAMGQEIVRRQSIHELGKRSRLWNHEDIYHVLRQKTGTEAVQCISLDICKIKQINLHANTFEKMNNLRLLHFHMSNPEEHSKVRVSGGLEIFPYNLRVLQWDRYPLRSLPSSFLSENLVELDMRNSQLEKLWDEDQKLPNLRRIDLRGSKHLGVLPDLSHAPNIEEIILNDCTSLLQVYSSNSLVKLNRLWLDGCAKLKDVNLPRNVYRRSSWLVASYSYLDLENFSFNKVKIRLSVPEHSNISIFKFQAVSFPFRGITESMDSLECEELKLLGESLTSLLPYLSELRWSSSIVNLSKLFELDLSYYNTHETASGNSSILKFTILKLMRASPRISTTAKCSIYKKEIAVNEVVSSLEDLIEPKELTLPLVLGAAALALCSQSSSNIVDGAAALLAALWVSCAPSPEVVGSSFDTCAAALAFQLLTSSFPILFSISACLQMLQKLGFC 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00057 452 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 300 IPR044974 GO:0006952
Bva06g00057 452 SUPERFAMILY L domain-like 46 328 - -
Bva06g00057 452 Pfam Leucine Rich Repeat 122 141 IPR011713 -
Bva06g00057 452 Gene3D Ribonuclease Inhibitor 42 217 IPR032675 -
Bva06g00057 452 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) FAMILY-RELATED 1 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00057 Bva-Chr6 1645253 1651157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00057 1 206 WRKY Transcription Factor Family AT4G12020 43.721 1.19e-36 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00057 - - adu:107481402 264.618