Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00051 ATGACCAAAAACCCAAGTAAGTTGGCTGAAGTGGACTATTCATCTGAGACATTGAAATTACCTATTAGGGTAACAATCATGTGGAAGGTCTTCAAGTTTGGGAAAATGCAATCTCTAGACATGGTTTTTATGGATGAGGATGGTTTGAAGATGCTAGCATCCATACATCATTCTATGGTGGACAAATTTAAGCACTTATTGGAAGAGGGGAAAACATATATCATGACTAATTTTGCGGTATTGGAAAATGACCAACAGTTAAGGGTTTCAAAGTTGCTTTACAAGTTGAAGTTTGTGCGGACAACAACAATTAGGGAGTGTGTGCTTGCAAATATTCCACTGCATGCATTTTCATTCACACCTTTTGAAAAGATCTTATTTGAAAAGGCTCCATCAAACGTTTTAGTAGATGTTATTGGGCAGGCTTTCAATGTGGATGATGGCCGAAATGTTAAcgtgaaaagaaagaacactGTGTCACCAATGAATGTTATATCATGCACTTTGTGGAATGATTTTGCCAATAAATTTATCTCCTACATGGAGATGAACCCTGCTAGCCTAGTGGTGATTATTCTAACTCAAGCAAATATCAAAGACACTAAGAGCAGTTTGTATCCGGTTGGGGTTCAAAGCTATTGGACAGCATCAAAATTGTTTATTGATGAGCATATCAAAGAGATCAATGAGTTTAAAGCAAGTTTGGCAAAATGGGATAGTTTTGTCTCCAAACAATATTCGCAGTATTCACAATCTTCTCAAATGACTGACGATGAGAAGTTCATAAAGAATACTCCTCTGAAAGCTATGTTTGAATTGCAACAATTCAAGGAGGCCAATTTGTGTGTGACAGTTGGACAGATTGCCAAGGTCTACACTGACCCTGGATGGTTCTTCTATGCTTGCACTAAATATAGGGTTGAGGTTCTGGTGCATGATGAAGAAAAGCATGCAAGGTTTGTCCTATGGGATCGTAAATGCATGAAGTTGACCGGCCATACTGTCAATGAGTTGATTGAACAGCTGCGCAAAGATAAGATTGAGCGTATTAAGACAAGCATGTTAGTAGATAGCCAATCACAAGAGGGATCAGTTGGCTTTGTGACCCCATCCAAGAGACTCGAGGCTTCTTTCTTGGATGGTGATGATGCCATCAATCTATCCTCTGGAGATTTGTCCATGACCAAATGCCATAAACAGAAGTTTGCTAAATG 1214 0.3839 MTKNPSKLAEVDYSSETLKLPIRVTIMWKVFKFGKMQSLDMVFMDEDGLKMLASIHHSMVDKFKHLLEEGKTYIMTNFAVLENDQQLRVSKLLYKLKFVRTTTIRECVLANIPLHAFSFTPFEKILFEKAPSNVLVDVIGQAFNVDDGRNVNVKRKNTVSPMNVISCTLWNDFANKFISYMEMNPASLVVIILTQANIKDTKSSLYPVGVQSYWTASKLFIDEHIKEINEFKASLAKWDSFVSKQYSQYSQSSQMTDDEKFIKNTPLKAMFELQQFKEANLCVTVGQIAKVYTDPGWFFYACTKYRVEVLVHDEEKHARFVLWDRKCMKLTGHTVNELIEQLRKDKIERIKTSMLVDSQSQEGSVGFVTPSKRLEASFLDGDDAINLSSGDLSMTKCHKQKFAK 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00051 404 SUPERFAMILY Nucleic acid-binding proteins 17 107 IPR012340 -
Bva06g00051 404 Pfam Domain of unknown function DUF223 41 135 IPR003871 -
Bva06g00051 404 Gene3D - 110 241 IPR012340 -
Bva06g00051 404 PANTHER NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN 35 243 - -
Bva06g00051 404 Gene3D - 4 107 IPR012340 -
Bva06g00051 404 PANTHER DNA BINDING PROTEIN-LIKE 35 243 - -
Bva06g00051 404 CDD RPA1_DBD_B_like 137 235 - -
Bva06g00051 404 SUPERFAMILY Nucleic acid-binding proteins 117 235 IPR012340 -
Bva06g00051 404 CDD RPA1_DBD_A_like 19 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00051 Bva-Chr6 1561333 1563772 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00051 34 252 Core DNA Replication Machinery Family AT2G06510 24.569 3.73e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00051 - - gmx:102661204 191.43