Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00042 ATGAGAGGGGCTGCCAGACGCGATGAGGTCGCCAGTAGTAGCCGCGCTGCTACCCGTGCCGGCGACCAACTCCGAGAGGTGAAGATAGAGCGGGCGAGTACTAGCCGGGTCGAGGCGTCTGGGTTTGAGTCGACTGAGGACAGCCAGCAGGATGCGGCGGGTCGTCGGGTGATTCGTTCGAAGTATCTGGCACTCATGAATCTCATGAAAGAGAAAAGAGATGATTTGATGAGTACGGATTCTGATAGATTCAATGCCATTATGGATGAGGTGGAGAAGTTGCACGAGCAAGTTCAGAAACCCCGGGAGCAAGTTGCAGATGCTGAGGCACTGCTGGACTTGGCTACCAGTTTGGTGGGCTCTGCTAAGGCTCTGATGAATGATGGTATTACCCCTTCACAATTTGTTGGCTGTTTGCTCAATGATTTTGGGAGTTCCAGCAGCTTGGGTCAAAGCAGCCAAGGTGcccaaaattcaattaactggAAAGAAATTGGGATGACTGTTTCACCAATTTTTATGGAAGGACATGGCTGTAGCACCATGCTTGGTCCCATGGAAAATGAGTTGAAGCAACGGAAGACAACTACCCGCGGAAAACGTGCTGCAAGGCCAACTACAAAAGCTAGGCCAGAAGAGATTAATGATGCTGGGACAGATGAGAAAACTGATACTGATAAAAATATGGCCAAAATGTTTGAAATCTTAAGGTTGAAGAAACGAGTGAGACTTGAAAGTCTAATTCTTAACAGAAAATCATTTGCTCAGACAgtggaaaatttatttgcactGTCATTCTTGGTTAAAGATGGGCGTGTTCACATCTCTGTTGATGAAAGTGGTTCTCATTTTGTGGtgCCTAAGAATGCGCCAGCTGCAAACTTGGTCCTTTCAAAAGAAGTTTCTTACTCTCATTTTATGTTCAGATATGATTACCAAGATTGGAAGTTAATGAAGGACGTGGTGCCTCAAGGAGAGGAGCTCATGCCAGATAGAATACACTATGGCACTGTGGTTGACTCCCAAGCTGAGATAGGTACTTTCACTTCCCAACCTGTATTGGTTGCGACACCAATTAGGAAGCTTTCCAGAAACAGAGGATTGATTTTACAGGAGGAAGGTCTTGTAGAAGAAACTCCTGAATGCGACGGGGAAGCTGCTTCTAAGACACTTGGACTGAATGTAGATGGCCCACTCAAGGAGGTGGACCTCATTGCCAACAATATGATTACTGATAAAGGCGCATCATTAGACAAGTTGATGTACAACAAGCTGAAGGCTGTATGGGGTATTCAAGGTGGAATGGAGCTAGTGGATCTAGGACATGGCTGTTTCCTAGACGTCATGTTCAAACCTTCCGGTCATGAAATAGAAACCATCAAACCTTGGGTTAGATTCTTGGAACTTAACATGTTACACTATAGTGAGTTGCTTCTCATGACAATAGCCAAGGAGATTGGGACGCCAGAAGTAGAGAATGATATGGGTCAGAAGCAAAAAGTTCAACTTGTGAAGTATAAGTG 1523 0.4445 MRGAARRDEVASSSRAATRAGDQLREVKIERASTSRVEASGFESTEDSQQDAAGRRVIRSKYLALMNLMKEKRDDLMSTDSDRFNAIMDEVEKLHEQVQKPREQVADAEALLDLATSLVGSAKALMNDGITPSQFVGCLLNDFGSSSSLGQSSQGAQNSINWKEIGMTVSPIFMEGHGCSTMLGPMENELKQRKTTTRGKRAARPTTKARPEEINDAGTDEKTDTDKNMAKMFEILRLKKRVRLESLILNRKSFAQTVENLFALSFLVKDGRVHISVDESGSHFVVPKNAPAANLVLSKEVSYSHFMFRYDYQDWKLMKDVVPQGEELMPDRIHYGTVVDSQAEIGTFTSQPVLVATPIRKLSRNRGLILQEEGLVEETPECDGEAASKTLGLNVDGPLKEVDLIANNMITDKGASLDKLMYNKLKAVWGIQGGMELVDLGHGCFLDVMFKPSGHEIETIKPWVRFLELNMLHYSELLLMTIAKEIGTPEVENDMGQKQKVQLVKYK 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00042 507 PANTHER UNCHARACTERIZED 25 386 IPR027786 GO:0005634|GO:0006281|GO:0030915
Bva06g00042 507 MobiDBLite consensus disorder prediction 192 224 - -
Bva06g00042 507 Pfam Nse4 C-terminal 242 328 IPR014854 -
Bva06g00042 507 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 25 386 - -
Bva06g00042 507 MobiDBLite consensus disorder prediction 205 224 - -
Bva06g00042 507 MobiDBLite consensus disorder prediction 1 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00042 Bva-Chr6 1464020 1468164 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00042 1 389 Non-SMC Element family AT1G51130 49.118 4.04e-125 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00042 K22825 - gmx:100792117 411.764