Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00039 ATGGCTCAGAAAGGCAGTGAGGGACCTGCTGTTGGCATAGATTTTGGTACAACATACTCATGTGTTGGAGTGTGGCAGAATGGTAGAATCATCTTCATCAACCAAGGAAATAAAACGGCCCAAAGGTTGATTGGTGAAGCTGCAAAGAACTGGTCTGCTAGGAACCCTGCAAACACCATATTTGATGCAAAGCAGTTAAATGGTACGCGAGATTGCAGAAAACGACCTAGGGTCAACCATCAAAACGCGGTTATCACTGTGCCCGCTTTCTTTAATGACGCGCAGCGCCAAGCTACAAAAGATGCTGGTGCTATTGCTGGCCGTAATGTTATGCGTATAATCAATGAGCCAACAGCAGCAGCTATTGTATATGGTCTTGACAAGAATGCTAGCATTGATGGTCAAAGGAATGTTTTCATCTTTGATCTTGGTGGTGGTACTTTTGATGTGTCTCTCCTCTCGATAAAACAGAACGACTTCGAAGTAAAAGGCACTGCAGGAGACACTCACCTAGGAGGTGAGGGCTTTGACAACAGATTGGTGAACCACCTTGAGGCTGGAACTGCTTGTGAGAGAGCCAAGAGGATACTGTCATCTTCGGCTGAAACAACCATTAAGGTGTATTCTTTGTATGGGGATATTGACTTCTCTTCAACGATCACTAGTGCAAGATTTGAGGAGTTGAACATTGACctctttaagaaatatatgaaGACGGTGAAGAAGTGTCTTAAAGATGCAAAGATCGACAGACATAGTATCCATGATGTTGTCCTCATTGGTGGGACAACAAGGATTCCCATGGTGCAACAGCTATTGCAAGATTTCTTCAATGGGAAGGATCTATGCAAGAGCATCAACCCTGATGAGGCGGTTGCATATGGTGCTGCTGTCTA 896 0.4386 MAQKGSEGPAVGIDFGTTYSCVGVWQNGRIIFINQGNKTAQRLIGEAAKNWSARNPANTIFDAKQLNGTRDCRKRPRVNHQNAVITVPAFFNDAQRQATKDAGAIAGRNVMRIINEPTAAAIVYGLDKNASIDGQRNVFIFDLGGGTFDVSLLSIKQNDFEVKGTAGDTHLGGEGFDNRLVNHLEAGTACERAKRILSSSAETTIKVYSLYGDIDFSSTITSARFEELNIDLFKKYMKTVKKCLKDAKIDRHSIHDVVLIGGTTRIPMVQQLLQDFFNGKDLCKSINPDEAVAYGAAV 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00039 298 Gene3D - 284 298 - -
Bva06g00039 298 PANTHER 70 KDA HEAT SHOCK PROTEIN 81 298 - -
Bva06g00039 298 Gene3D - 236 283 - -
Bva06g00039 298 PRINTS 70kDa heat shock protein signature 286 298 - -
Bva06g00039 298 PRINTS 70kDa heat shock protein signature 9 22 - -
Bva06g00039 298 ProSitePatterns Heat shock hsp70 proteins family signature 2. 140 153 IPR018181 -
Bva06g00039 298 PANTHER HEAT SHOCK PROTEIN 70KDA 81 298 IPR013126 GO:0005524|GO:0140662
Bva06g00039 298 Pfam Hsp70 protein 81 185 IPR013126 GO:0005524|GO:0140662
Bva06g00039 298 Pfam Hsp70 protein 10 70 IPR013126 GO:0005524|GO:0140662
Bva06g00039 298 Pfam Hsp70 protein 188 298 IPR013126 GO:0005524|GO:0140662
Bva06g00039 298 SUPERFAMILY Actin-like ATPase domain 133 298 IPR043129 -
Bva06g00039 298 Gene3D - 2 73 - -
Bva06g00039 298 Gene3D Actin; Chain A, domain 4 188 235 - -
Bva06g00039 298 PANTHER 70 KDA HEAT SHOCK PROTEIN 5 70 - -
Bva06g00039 298 Gene3D - 129 171 - -
Bva06g00039 298 PANTHER HEAT SHOCK PROTEIN 70KDA 5 70 IPR013126 GO:0005524|GO:0140662
Bva06g00039 298 Gene3D Actin; Chain A, domain 4 172 185 - -
Bva06g00039 298 ProSitePatterns Heat shock hsp70 proteins family signature 3. 257 271 IPR018181 -
Bva06g00039 298 Gene3D - 78 128 - -
Bva06g00039 298 SUPERFAMILY Actin-like ATPase domain 9 128 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00039 Bva-Chr6 1404907 1416445 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00039 1 298 Calmodulin-binding Proteins AT3G12580 56.806 4.17e-137 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00039 K03283 - sly:101247151 387.497