Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00028 ATGCGAATGGGAGCTTCTTTGCTTCGTCTTCATTTCCATGATTGCTTTGTCAATGGTTGTGATGGATCGGTATTACTAGATGGAGGTGACGACAGTGAGAAGTCTGCACGTCCAAATCTTAACTCTTTAAGGGGATTCGAAGTTTTGGACACAATCAAAAGTTCAGTGGAGAGTGCTTGCAGTGGAGTTGTCTCATGTGCAGATATTTTAGCCATAAGTGCAAGAGATTCCGTTGTTctgAGTGGGGGTCCTTCATGGAGTGTCCTGCTAGGAAGGAGGGATGGAACTATCTCAAATGGGACACTAGCAAATTCTGCACTTCCTTCTCCGTTTGAAGATGTGGATACCATCATCTCGAAGTTCAATAATGTTGGCCTCAATCTCACCGATGTTGTAGCTTTATCAGGTGCCCATACCATTGGCCGATCAAGGTGTGTTTTCTTTAGCAACAGATTATTCAACTTCTCAGGAACAGGTGCAGCAGATGCTACACTTGACACTGACATGCTCACTGATTTACAAACTTTATGCCCTCAAAACGGCGATGGAAACACAACTGCAGTCCTCGATCGGAACTCGGTCGATCTATTTGACAACCACTACTTTCAAAACTTGCTCAATGGAAAGGGCCTTCTTAGTTCTGACCAAATTCTATTTTCAAGTGACGCGGCCAATTCAACAAGCAAACCATTCGTCCTGAGCTACAGCAacaatagttttcttttcttaaggGATTTTGTCAATTCCATGATCAGGATGGGAAATATAAATCTGAAGACTGGGACTGATGGAGAGATTAGGAAAAATTGCAGGGTTGTAAATTCATA 827 0.4184 MRMGASLLRLHFHDCFVNGCDGSVLLDGGDDSEKSARPNLNSLRGFEVLDTIKSSVESACSGVVSCADILAISARDSVVLSGGPSWSVLLGRRDGTISNGTLANSALPSPFEDVDTIISKFNNVGLNLTDVVALSGAHTIGRSRCVFFSNRLFNFSGTGAADATLDTDMLTDLQTLCPQNGDGNTTAVLDRNSVDLFDNHYFQNLLNGKGLLSSDQILFSSDAANSTSKPFVLSYSNNSFLFLRDFVNSMIRMGNINLKTGTDGEIRKNCRVVNS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00028 275 CDD secretory_peroxidase 2 273 IPR033905 GO:0004601|GO:0042744
Bva06g00028 275 ProSitePatterns Peroxidases active site signature. 4 15 IPR019794 GO:0004601
Bva06g00028 275 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva06g00028 275 PRINTS Haem peroxidase superfamily signature 4 18 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva06g00028 275 PRINTS Haem peroxidase superfamily signature 130 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva06g00028 275 PRINTS Haem peroxidase superfamily signature 82 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva06g00028 275 PRINTS Haem peroxidase superfamily signature 64 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva06g00028 275 PANTHER PEROXIDASE 59 1 273 - -
Bva06g00028 275 Gene3D Peroxidase, domain 2 108 253 - -
Bva06g00028 275 PRINTS Plant peroxidase signature 204 221 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva06g00028 275 PRINTS Plant peroxidase signature 188 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva06g00028 275 PRINTS Plant peroxidase signature 82 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva06g00028 275 PRINTS Plant peroxidase signature 129 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva06g00028 275 PRINTS Plant peroxidase signature 63 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva06g00028 275 PRINTS Plant peroxidase signature 6 26 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva06g00028 275 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva06g00028 275 PRINTS Plant peroxidase signature 248 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva06g00028 275 SUPERFAMILY Heme-dependent peroxidases 2 274 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bva06g00028 275 ProSitePatterns Peroxidases proximal heme-ligand signature. 130 140 IPR019793 -
Bva06g00028 275 Pfam Peroxidase 2 228 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva06g00028 275 Gene3D - 2 274 - -
Bva06g00028 275 ProSiteProfiles Plant heme peroxidase family profile. 1 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva06g00028 275 PANTHER PEROXIDASE 72-RELATED 1 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00028 Bva-Chr6 1148929 1152429 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00028 1 274 Peroxidase AT5G19890 66.058 1.00e-128 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00028 K00430 - gmx:100787073 438.728