Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00011 atgggTTCCCAGCACGAGACAGTGGCAGCTGTATTGTGTGCAGTGGTGGTTTTGGGAGGATTATCAGTTTCAAATTCTCAGCTAAGTCCGACGTTTTACGATCAGACATGTCCAGGCGTCTATGTTGTTGTATTTGGGGTCGTTTGGAGAGCTTCCCTGAGCGATCCTCGTATTGGTGCCAGTCTCATCAGGCTTCATTTCCATGACTGCTTTGTTCAAGGTTGTGACGCATCACTTTTATTGAACTCTACTGCCGACGGAACAATAGTGAGCGAACAAGGATCTTTGGCAAATAATAACTCAATAAGGGGTTTGGACGTTGTCAACCAAATTAAGGCCGCAGTGGAATTCCATTGTCCTGCCACTGTTTCTTGCGCCGATATTCTTGCCATTGCGGCACAAGTATCCGTTCTTCTGGATGGGGGTCCGTTTTGGAGGGTTCTATTAGGAAGAAGGGACAGCACAACGGCAAACATAACCCTTGCTGATGAGAACCTACCACCTCCATTCTTCACCCTCGATCAACTAAAGCAAGCCTTTGCTGTTCAAGGCCTCAACACAACTGATTTGGTTTCTCTGTCAGGGGCTCATACATTTGGAAGGGCTCAATGCAGGACATTTATTGGCCGATTATACAATTTCAACAATACTGGAGTTCCTGATCCAACCCTAAACACGACTTGGTTACAATCACTGCAACTGCTATGCCCCCAGAATGGAGATGGATCAGTCATAACCAATTTGGATCTAAGCACTCCAGACCTATTTGACAATAGATACTACACCAATCTCCTGAGCAACAATGGCCTGCTCCAGAGTGACCAGGAGCTGTATTCAACTCCTGGTGCCGATACCAGAAAAATTGTCAAACTTTTCAGCAGGAACCAATCTGCTTTCTTTGCCAACTTTACTGcatcaatgataaaaatgggTAATATTAGCCCTTTAACCGGTTCTCAAGGACAAATTCGATTGCATTGCAATTTTGTTAATCCAGCCACATATGCTTCTGTATCGGCTGGTCTTAGCTACAAAAAGTCAGAAGATGTTCTGATTAGTTCTATCTA 1067 0.4377 MGSQHETVAAVLCAVVVLGGLSVSNSQLSPTFYDQTCPGVYVVVFGVVWRASLSDPRIGASLIRLHFHDCFVQGCDASLLLNSTADGTIVSEQGSLANNNSIRGLDVVNQIKAAVEFHCPATVSCADILAIAAQVSVLLDGGPFWRVLLGRRDSTTANITLADENLPPPFFTLDQLKQAFAVQGLNTTDLVSLSGAHTFGRAQCRTFIGRLYNFNNTGVPDPTLNTTWLQSLQLLCPQNGDGSVITNLDLSTPDLFDNRYYTNLLSNNGLLQSDQELYSTPGADTRKIVKLFSRNQSAFFANFTASMIKMGNISPLTGSQGQIRLHCNFVNPATYASVSAGLSYKKSEDVLISSI 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00011 355 Gene3D Peroxidase, domain 2 167 310 - -
Bva06g00011 355 PANTHER PEROXIDASE 7 337 - -
Bva06g00011 355 PANTHER PEROXIDASE 72-RELATED 7 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva06g00011 355 Pfam Peroxidase 52 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva06g00011 355 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Bva06g00011 355 ProSiteProfiles Plant heme peroxidase family profile. 27 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva06g00011 355 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Bva06g00011 355 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva06g00011 355 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva06g00011 355 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva06g00011 355 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva06g00011 355 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva06g00011 355 SUPERFAMILY Heme-dependent peroxidases 27 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bva06g00011 355 Gene3D - 32 331 - -
Bva06g00011 355 CDD secretory_peroxidase 27 330 IPR033905 GO:0004601|GO:0042744
Bva06g00011 355 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva06g00011 355 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva06g00011 355 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva06g00011 355 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva06g00011 355 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva06g00011 355 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva06g00011 355 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva06g00011 355 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva06g00011 355 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00011 Bva-Chr6 737865 741490 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00011 15 355 Peroxidase AT5G06730 56.598 1.77e-131 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00011 K00430 - aprc:113852209 444.891