Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02652 ATGGAATTTGTTTCTCTGGTTGTTGGGAAATTATTGGACTACACTTTGATGCCAGTGGTAAGACAGGTGGGATATGTGATTTCCTACAACGACAATGTAGCCCAGCTTAAGGAACAAGTTGAGCAACTCCGACTTGCTAGAGAGAGTTTGCAAAATAGAGTTGATACTGCCACAAGAAAtgtggaagaaattgaaggtgAGGTTCTAAAGTGGCTAAGTGAAGTGGATGAGATTGCTTTGAAGATAGAGAAATTTCAGGAATATTGCCACAAAGATGCAAGGTGTTCCAGCAGGTCATTCCCAAACTTGTGTTGGAGTTATCAACATAGTAGAAAGGCAAAAAAATTGGCACAGGAAGTTGTTGatattaagagaaagaaagaatttgctCAAGTTTCTCATCTTGGAGAATTGAAAATCATAGAGGCAGGGTCTTCATTTACCACAAGTAGTGAGACCTTTGAATCTAGGGTTTCAGCATTGAACCGGATAACGGAGGCACTAGCAGATCCCAATCTTAACATGATTGGAGTGTATGGTTTAGGTGGTGTGGGGAAGACCACTCTAGTCCATGAGGTTGTCAAAAAAGCTAAAGAACAATCATCTGATTTAAAGGTTGTTATTGCCCTTGTGAAACAAAACCCAGAGACGAGAGAAATTCAACAACAAATTGCTGAAATGTTGCAACTTGAATTGAAAGAGCAGACCCCAGTTGTGAGAGCAACTCGGCTACGTCAAAGGTTAGAGCAAGAGAAAAACATTCTTGTGATTCTCGATGATCTTTGGAAAAAGCTTGATTTGGACGAAATAGGCATCCCTTAtgggaaaaagaacaaaaattgtaaaatattaatgacatCCAGAAACAGGGGTGTATTGTCTGATCAAATGAATACTCAAAGGAACTTTGGGCTTGGAGAGTTGGCAGATTCAGAAGCTTGGAAGTTATTTAAGGAGAAAGCTGCGCTCAATGAATCTTTGCAAAGTGCTGAATTGTTGTCTGTAGCAAGAGACGTAGTTCAAGAGTGTGGTGGGTTACCAATTGCCATTGTGACCGTTGCTGCTGCactaaaaggaaagaagatagTAGAGTGGAGGGATGTACGACGACGACTACAAACTcatctttattttgatataaatagaCCAATTGAAGTGAgttatgaaaatttagaagATGACCGTCTCAAGTCAATATTTGTGCTTGCTGGTATCATTACTTCATCTTCCACCATGGATTTGTTCAAGTATTCTTGCGGTTTGGGTTTATTCCATGACATGAATAAAATGGAAGAGATGAAAGATAGCTTCGAGACTAGCATTAGAAAACTGAAAGATTCATGCTTGTTGCAAGATAGTGATAATTCCAATGACCGTTTTACAATGCATGATGTTGTTCGAGATGCAACCATATCAATAGCATCTAGGGATCTATGGTTCttcttgaaaagaaatgaaaggtTAGGTGAAGAATGGCTAATGGATGATAAGTTGAAAAGTTGCAAAGCAATATTTCTAGACTTTTGCCTCATTAAAAAGCTTTCTAGAGGACTTGATTGTCCTAACCTCACATTTTTCCACCTAGAGAATAATGACCCCTCTCTAAAATTACCAGacaactttttctttggaaTCCCTGCACTCAAAGTATTAgttttgattaaaatgaacTTTGAGTTTCTACCTTCttcaattaatcttttaagCAACTTGCACACCTTGTGTCTTCATCAATGTGTTCTAGGGGACATAGAAATAATAGGGGAATTAAgaagtttaaaaattcttagtaTTGCTGGCTCTGTGATTGAACAATTGCCGCGAGAGATAGGACAGTTGTTGAAGCTGCAGTTGTTGGACTTGAGCGACTGTTCCCAGCTTGAATTTATTCCTCATGGTGTTCTATCAGAGTTGAAAATGCTGGAAATGTTGTTTATAGGAGGCAAAAGTTTTGATCAGTGGTCTGTTGGCCATCAACAATCTATTGCTAGTCTTGATGaactaaattatttgaacCAGTTGAGCTCCTTAGTAGTACATGTTCGTGATGGAATCATGCTTCCCAAAGAACCTTTGTTTGAGAAGTTGCAATTGCAAAGATATAACATAAACATAGGTGATTATCAGTACATGTTTGGCATATCTAATATTTCATGTTCCTTGCGTCTGGATCTCAATATTGGTATTAATGATTCAGAGAATTACTTCGGAGGTTTGTTGGATTCTGTTGAAGCTCTCTACTTGAGAAACTTTAAAGGTGCCAAGAATGTGGTTCCAGATATAAACGAAAGAGGTTTGTTAGAATTGAAGCATCTTGAAGTTTGTTTTAACGATGAACTTCAGTTCTTAGTTGACTCAGTGAGTCAAAGGGATCTCTTCTCCAAATTGAAGGTTATTGTAGTGATTGGATgtgataaaatgaaaagccttttttcattttctcttccaacATGTCTTCCACAACttgaaagaattgaaatttgCTTTTGTGACCTTTTAGAGGGAATAGTTTCTGATGATGGAAAGGTTGTCGACGTGTTCCAGTTTTCAGAATTGCACACTTTGACTTTAACTGCTGTACCTGCACTAATTGGCTTCTATTATCAAGATAAAACAACTTTTATAGAACAACCAAAGAAGACGCAATTTTCAGATGGCAAGGATACTGGAGAAATAATGGATAACAATAATCTTGATCCTCCTGTTGTACTTTTCTCGAAAAAGGTTATTTTCCCCAACCTAGAGACTTTGAGTATCTGGGATGCAgataaattgaacaaaatatgGGATTGGCAAGGCCAACAATTTGATGGGTCATCTTTTTCCCAATTGAAAAGTCTAAATATAAGTAGCTGTCATGGAATCTCAGAATTACTTCCTTTTAATGTATTAGAAAACTTGGAAAATCTTGAAGTGAAATCTTGTTATTCGCTTGaagtaatatttgatttgaagggagcaaagaaagaagggaTACATGCTGTTGTTAGATCATCACATTTGAGGAAATTGATTTTAAGTAACCTACCCAAGCTGAAACATGTTTGGAATAGAGATCCTCAAGAAGTTATTGATTTTCAATGTTTGTCAGAAGTAGAAGTTTCAAACTGTGACAGCTTGAAAACGTTATTTCCAGTCTCTATTGCTAAGGCTCTTGTGAAACTTCAAGAGCTAAGGATAACAAATTGCCATGAGCTTGAGAATATTGTtggagggaaagaaaaaggaccTGATGTCTCACTCAGCTTCATATTTTCTCAAGTAACTATATTGGAACTTGAAAACTTACCAAAACTTACAAGGTTCTACCCTGGAACATATTCTACAGAATGGCCACTGTTAGAAGAATTATATCATGTACATGTTAACAGGGAACTATGTATTTTTGGGACTGGATTTCTTGAAACATCAAATCAGCAGCCTCTCTTGGTTGAAAAGATGGCGGAGTCCCAAGGAGGTGTGGCTCCCCCTTCTCATGCTAGGCCGATCGAGGGTGTTGTTGCCTCTTCAAGTGACAATGTGGATGAGACGGCTTGCCCTCCTTTAGCTCGGAGGGGttcaaaaaagaagatgaCAGCTAGGCGAGATTCACCTCTAGGAGaTACTTTTGCGTCTTCTGCCGACCTCGCCATAGATACTGGGGCTGACGACGCTCCTATCGCTCCCACGGGTGCTGACACTCGCGGCTA 3689 0.3538 MEFVSLVVGKLLDYTLMPVVRQVGYVISYNDNVAQLKEQVEQLRLARESLQNRVDTATRNVEEIEGEVLKWLSEVDEIALKIEKFQEYCHKDARCSSRSFPNLCWSYQHSRKAKKLAQEVVDIKRKKEFAQVSHLGELKIIEAGSSFTTSSETFESRVSALNRITEALADPNLNMIGVYGLGGVGKTTLVHEVVKKAKEQSSDLKVVIALVKQNPETREIQQQIAEMLQLELKEQTPVVRATRLRQRLEQEKNILVILDDLWKKLDLDEIGIPYGKKNKNCKILMTSRNRGVLSDQMNTQRNFGLGELADSEAWKLFKEKAALNESLQSAELLSVARDVVQECGGLPIAIVTVAAALKGKKIVEWRDVRRRLQTHLYFDINRPIEVSYENLEDDRLKSIFVLAGIITSSSTMDLFKYSCGLGLFHDMNKMEEMKDSFETSIRKLKDSCLLQDSDNSNDRFTMHDVVRDATISIASRDLWFFLKRNERLGEEWLMDDKLKSCKAIFLDFCLIKKLSRGLDCPNLTFFHLENNDPSLKLPDNFFFGIPALKVLVLIKMNFEFLPSSINLLSNLHTLCLHQCVLGDIEIIGELRSLKILSIAGSVIEQLPREIGQLLKLQLLDLSDCSQLEFIPHGVLSELKMLEMLFIGGKSFDQWSVGHQQSIASLDELNYLNQLSSLVVHVRDGIMLPKEPLFEKLQLQRYNINIGDYQYMFGISNISCSLRLDLNIGINDSENYFGGLLDSVEALYLRNFKGAKNVVPDINERGLLELKHLEVCFNDELQFLVDSVSQRDLFSKLKVIVVIGCDKMKSLFSFSLPTCLPQLERIEICFCDLLEGIVSDDGKVVDVFQFSELHTLTLTAVPALIGFYYQDKTTFIEQPKKTQFSDGKDTGEIMDNNNLDPPVVLFSKKVIFPNLETLSIWDADKLNKIWDWQGQQFDGSSFSQLKSLNISSCHGISELLPFNVLENLENLEVKSCYSLEVIFDLKGAKKEGIHAVVRSSHLRKLILSNLPKLKHVWNRDPQEVIDFQCLSEVEVSNCDSLKTLFPVSIAKALVKLQELRITNCHELENIVGGKEKGPDVSLSFIFSQVTILELENLPKLTRFYPGTYSTEWPLLEELYHVHVNRELCIFGTGFLETSNQQPLLVEKMAESQGGVAPPSHARPIEGVVASSSDNVDETACPPLARRGSKKKMTARRDSPLGDTFASSADLAIDTGADDAPIAPTGADTRG 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02652 1229 Coils Coil 427 447 - -
Bva05g02652 1229 PANTHER - 6 791 - -
Bva05g02652 1229 PANTHER - 999 1062 - -
Bva05g02652 1229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 401 IPR027417 -
Bva05g02652 1229 Gene3D Ribonuclease Inhibitor 891 1051 IPR032675 -
Bva05g02652 1229 PANTHER PHOSPHATASE, PUTATIVE-RELATED 6 791 - -
Bva05g02652 1229 PANTHER PHOSPHATASE, PUTATIVE-RELATED 999 1062 - -
Bva05g02652 1229 Coils Coil 26 67 - -
Bva05g02652 1229 Gene3D Ribonuclease Inhibitor 493 865 IPR032675 -
Bva05g02652 1229 PANTHER PHOSPHATASE, PUTATIVE-RELATED 794 981 - -
Bva05g02652 1229 MobiDBLite consensus disorder prediction 1169 1229 - -
Bva05g02652 1229 SUPERFAMILY L domain-like 462 862 - -
Bva05g02652 1229 SUPERFAMILY RNI-like 910 1067 - -
Bva05g02652 1229 SMART AAA_5 172 382 IPR003593 -
Bva05g02652 1229 Gene3D - 307 392 IPR042197 -
Bva05g02652 1229 CDD AAA 157 287 - -
Bva05g02652 1229 Pfam NB-ARC domain 161 381 IPR002182 GO:0043531
Bva05g02652 1229 PRINTS Disease resistance protein signature 248 262 - -
Bva05g02652 1229 PRINTS Disease resistance protein signature 611 627 - -
Bva05g02652 1229 PRINTS Disease resistance protein signature 175 190 - -
Bva05g02652 1229 PRINTS Disease resistance protein signature 343 357 - -
Bva05g02652 1229 Gene3D - 139 304 IPR027417 -
Bva05g02652 1229 PANTHER - 794 981 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02652 Bva-Chr5 22094128 22101006 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02652 172 631 WRKY Transcription Factor Family AT5G45050 23.664 2.54e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02652 - - pvy:116134867 616.305