Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva05g02639 | atgGAGAGCAAAAATGCAGAGGAAATCCATGAACCAGCTTACACAACCTCAATCCATCACCTTCAAAATATGTATCCTACCCAGAAACCCATCTTTACTTCAAGCCTCATCAACATGGAAACAGGAGAAGGGTCTAAAGGATACCATGTTTTGGCTCAGTCTCATATGGATTTATCATCTCAAGCTCTACGTTGTATTCCATTTTACTACTCCCAACTGCACTCTTCTAATTCTCCAATCCTAATATCTGGTCAGAGATTTTCTCCAAAAACATCATCGCAGAGTGACAACAGCAATTTTGATGAAGCAAAGCTGCTTCTCGATGACcgcaagaagaaaagaatgaattcCAACAGAGAATCTGCTCGCAGGTCACGAATGAGGAAGAAGCAACAAATAGAAGCCCTCCAATATCAAGTTGAAAATCTGCAGACCATGAATCATAAGCTCTCACAGAAGATCGTTTACCTGTTGGAATGCAACCAACAAATACTACAACAGAATGCCCAACTGAAAGAGAAAGTTTCTTCCCTTCAACTAGCCCTCTCTGAATTGTTAGTTCCTCTTGCACCTGTTGAGGAAGCTAATCGCATCTCCAATGGCCTCACTACTTCCAGAATATA | 623 | 0.3965 | MESKNAEEIHEPAYTTSIHHLQNMYPTQKPIFTSSLINMETGEGSKGYHVLAQSHMDLSSQALRCIPFYYSQLHSSNSPILISGQRFSPKTSSQSDNSNFDEAKLLLDDRKKKRMNSNRESARRSRMRKKQQIEALQYQVENLQTMNHKLSQKIVYLLECNQQILQQNAQLKEKVSSLQLALSELLVPLAPVEEANRISNGLTTSRI | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva05g02639 | 207 | MobiDBLite | consensus disorder prediction | 102 | 129 | - | - | |
| Bva05g02639 | 207 | SUPERFAMILY | Leucine zipper domain | 110 | 161 | IPR046347 | GO:0003700|GO:0006355 | |
| Bva05g02639 | 207 | Pfam | bZIP transcription factor | 110 | 168 | IPR004827 | GO:0003700|GO:0006355 | |
| Bva05g02639 | 207 | Coils | Coil | 126 | 153 | - | - | |
| Bva05g02639 | 207 | PANTHER | BASIC LEUCINE-ZIPPER 70-RELATED | 1 | 203 | - | - | |
| Bva05g02639 | 207 | PANTHER | BASIC LEUCINE ZIPPER 43-RELATED | 1 | 203 | IPR044521 | - | |
| Bva05g02639 | 207 | SMART | brlzneu | 106 | 170 | IPR004827 | GO:0003700|GO:0006355 | |
| Bva05g02639 | 207 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 113 | 128 | IPR004827 | GO:0003700|GO:0006355 | |
| Bva05g02639 | 207 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 108 | 171 | IPR004827 | GO:0003700|GO:0006355 | |
| Bva05g02639 | 207 | MobiDBLite | consensus disorder prediction | 84 | 101 | - | - | |
| Bva05g02639 | 207 | Gene3D | - | 109 | 164 | - | - | |
| Bva05g02639 | 207 | MobiDBLite | consensus disorder prediction | 84 | 129 | - | - | |
| Bva05g02639 | 207 | Coils | Coil | 161 | 181 | - | - | |
| Bva05g02639 | 207 | CDD | bZIP_plant_GBF1 | 111 | 159 | IPR045314 | GO:0003700|GO:0006355 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva05g02639 | Bva-Chr5 | 21891254 | 21891877 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bva05g02639 | 100 | 193 | bZIP Transcription Factor Family | AT5G60830 | 57.447 | 1.37e-29 | 107 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | bZIP | Bva05g02639 | bZIP_1 | 1.7e-11 | CL0018 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bva05g02639 | - | - | aprc:113874797 | 206.838 |