Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02632 ATGGCCCCTCCAATGAAATCTGACTCACATCTTGTCAATGGTGAAGTGCAACACCTTAAACAAGAAGGAGACACCTTCATCTCTGCGTTGAAATTGGTGAATACTCTTGTGTTCCCAATGACGTTGAATTCCGCCATTGATCTTGGCATTTTTGATGTCATGGCCAAAGAAGGTGAAGGTGCCAAGCTCTCCGCCAAGGACATCGCAGCTAAGCTTCGCAGCGAGAATCCAGAAGCACCCGCAATGCTGGATCGTATCCTTAGGCTTCTGGCAAGTCACTCTGTGGTTTGTTGCTCTGTTGCTGAGGATAATCAAGTAGAGATGCTCTACAGTCTCACCCCTATGGCCTCTCAATATTTTGTCGCTGATGCTCAAGGTGTATCACTTGGGGCCGTGATGAAGTTAATTCATGACAAAGTCTTCTTGGAAAGTTGGTCTGAATTGAAAGGAGCTGTTATGGAAGGAGGGATACCATTCAACAGAGCTCATGGCATGCATGCCTTTGAGTATCCAAGCAAAGAACTAAGGTTCAATAAGGTTTTCAACAACGCCATGTTCAGTTCCACCAATATAATTATGAAGAAGGTTCTTGAAACATACAAAGGTTTTGAGAATGTGAATAAATTGGTAGATGTGGGCGGTGGTGTTGGGGTCAACCTTCACTTGATTACTTCCAAATACCCTCATATTCAGGGTATTAATTTTGACCTGCCTCATGTCATACAACATGCTCCTCCGTATTCTGGGATTGAACATGTGGGAGGAGATATGTTTAAAAGTGTTCCTCAAGGAGATGCCATTTTTATGAAGTGGATCCTTCATGATTGGAGTGATGAACATTGTATAAAACTGCTGAAGAATTGCTATGATGCTATTCCTGACGATGGGAAGGTGATTATTGTGGACTTCAATCTTCCTATTGTGCCCGAGACAAGTATGGCTGCTCAAACTGCTTACCAAGCTGATTTGTTAATGATGACTCAACACATAGGAGGGAAAGAGCGAACCAAACAAGAATTCTTGGAATTGGCAATAACTGCTGGATTTGGAGATGTCAAATTTGTTAGCCATATCGGTGGCACATGGATTATGGAGTTCCTCAAGTA 1106 0.4286 MAPPMKSDSHLVNGEVQHLKQEGDTFISALKLVNTLVFPMTLNSAIDLGIFDVMAKEGEGAKLSAKDIAAKLRSENPEAPAMLDRILRLLASHSVVCCSVAEDNQVEMLYSLTPMASQYFVADAQGVSLGAVMKLIHDKVFLESWSELKGAVMEGGIPFNRAHGMHAFEYPSKELRFNKVFNNAMFSSTNIIMKKVLETYKGFENVNKLVDVGGGVGVNLHLITSKYPHIQGINFDLPHVIQHAPPYSGIEHVGGDMFKSVPQGDAIFMKWILHDWSDEHCIKLLKNCYDAIPDDGKVIIVDFNLPIVPETSMAAQTAYQADLLMMTQHIGGKERTKQEFLELAITAGFGDVKFVSHIGGTWIMEFLK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02632 368 Gene3D - 9 119 IPR036388 -
Bva05g02632 368 PANTHER O-METHYLTRANSFERASE 1 368 IPR016461 GO:0008168
Bva05g02632 368 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 30 368 IPR016461 GO:0008168
Bva05g02632 368 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 368 - -
Bva05g02632 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 366 IPR029063 -
Bva05g02632 368 SUPERFAMILY "Winged helix" DNA-binding domain 24 117 IPR036390 -
Bva05g02632 368 Pfam Dimerisation domain 40 91 IPR012967 GO:0046983
Bva05g02632 368 Gene3D Vaccinia Virus protein VP39 122 368 IPR029063 -
Bva05g02632 368 Pfam O-methyltransferase domain 145 349 IPR001077 GO:0008171
Bva05g02632 368 PIRSF O-mtase 8 368 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02632 Bva-Chr5 21760039 21761630 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02632 16 368 Monolignol Biosynthesis Gene Families AT5G54160 52.394 2.61e-133 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02632 K13066 - gmx:100789402 471.085